Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0265
         (338 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119...    26   6.6  
01_06_0355 + 28657833-28660665,28660762-28661126                       26   8.7  

>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
            23812210-23812285,23813064-23813072,23813243-23813335,
            23813578-23813581,23813780-23814703,23814926-23815909,
            23816073-23816118,23816376-23816951,23817253-23817798,
            23817820-23818416
          Length = 2252

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 193  MKYMSLDNLNIVEVFQLNLKKLWKKCYIYSNKYCKKL 303
            +K  + D  N+V++FQL+     +KC +Y N  C++L
Sbjct: 1648 VKLQNSDLNNVVDLFQLSYLTESEKCNLYRN--CQEL 1682


>01_06_0355 + 28657833-28660665,28660762-28661126
          Length = 1065

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 109 NQRINLFSLNLPSSIE*YQNLPPAEHSYN 23
           N   N FS NLP+S+E +  L   + SYN
Sbjct: 611 NLSSNRFSGNLPASLELFSTLTYLDLSYN 639


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,051,189
Number of Sequences: 37544
Number of extensions: 82211
Number of successful extensions: 178
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)