Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0265
         (338 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   3.1  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   4.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   7.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   9.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   9.4  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 78  SHHQLNDIKIYHQQNIHIM 22
           SHH L+  ++ +QQ+ ++M
Sbjct: 72  SHHHLHHHQVLYQQSPYLM 90


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 310 KNSIFYNIYWSKYNIFSTTFLG-LAGIPRRYSDY 212
           KN+IFY +Y   +   ++  +G L GI  + S +
Sbjct: 26  KNAIFYQVYPRSFMDSNSDGIGDLKGIKDKLSHF 59


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
          protein.
          Length = 486

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 19 VHYMNVLLVVNFD 57
          +H+ NV+  +NFD
Sbjct: 1  MHFNNVIKYINFD 13


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 97  NLFSLNLPSSIE*YQNLPPAEHSYNELPI 11
           N  SL L    E  +NL   E  ++ LPI
Sbjct: 70  NHISLTLDLEYELVENLQANEKPWSTLPI 98


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 97  NLFSLNLPSSIE*YQNLPPAEHSYNELPI 11
           N  SL L    E  +NL   E  ++ LPI
Sbjct: 108 NHISLTLDLEYELVENLQANEKPWSTLPI 136


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,600
Number of Sequences: 438
Number of extensions: 1291
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7715466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)