Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0265
         (338 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g43030.1 68415.m05340 ribosomal protein L3 family protein con...    27   3.2  
At2g02390.3 68415.m00179 glutathione S-transferase zeta 1 (GSTZ1...    25   9.7  
At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1...    25   9.7  

>At2g43030.1 68415.m05340 ribosomal protein L3 family protein
           contains Pfam profile PF00297: ribosomal protein L3
          Length = 271

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 153 NREIYEPNEEIIFHEIYESG 212
           N E +EPN++++F EI++ G
Sbjct: 141 NIEGFEPNQKLVFDEIFKEG 160


>At2g02390.3 68415.m00179 glutathione S-transferase zeta 1 (GSTZ1)
           (GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
           S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
           (Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
           {Arabidopsis thaliana}; contains Pfam profiles PF02798:
           Glutathione S-transferase, N-terminal domain and
           PF00043:Glutathione S-transferase, C-terminal domain
          Length = 228

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2

Query: 100 INLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 2
           IN F +N+    E Y  L     SYNELP  +N
Sbjct: 186 INRFQINM----EPYPTLAKCYESYNELPAFQN 214


>At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1)
           (GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
           S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
           (Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
           {Arabidopsis thaliana}; contains Pfam profiles PF02798:
           Glutathione S-transferase, N-terminal domain and
           PF00043:Glutathione S-transferase, C-terminal domain
          Length = 221

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2

Query: 100 INLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 2
           IN F +N+    E Y  L     SYNELP  +N
Sbjct: 179 INRFQINM----EPYPTLAKCYESYNELPAFQN 207


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,319,528
Number of Sequences: 28952
Number of extensions: 76847
Number of successful extensions: 162
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 399440640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)