Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0260
(299 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 54 1e-07
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 52 3e-07
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 52 4e-07
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 52 4e-07
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 52 4e-07
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 52 4e-07
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 52 4e-07
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 52 4e-07
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 52 4e-07
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 52 4e-07
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 52 4e-07
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 52 4e-07
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 52 4e-07
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 52 4e-07
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 29 3.5
BC014214-1|AAH14214.1| 982|Homo sapiens AP2A1 protein protein. 28 4.7
X69490-1|CAA49245.1| 4650|Homo sapiens titin protein. 28 6.2
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVN 181
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVN 38
Score = 34.3 bits (75), Expect = 0.071
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 186 VHVSMSKNSXQPYCVTRRLVTKPXRI--MGYGRAVARIPR 299
VH ++ KN+ QPY V+ L R G GRAVARIPR
Sbjct: 40 VHTNLRKNNRQPYAVS-ELAGHQTRAESWGTGRAVARIPR 78
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +2
Query: 62 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVN 181
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 52
Score = 33.9 bits (74), Expect = 0.094
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 VHVSMSKNSXQPYCVTRRLVTK-PXRIMGYGRAVARIPR 299
VH ++ KN+ QPY V+ + G GRAVARIPR
Sbjct: 54 VHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 92
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVN 181
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
Score = 33.9 bits (74), Expect = 0.094
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 VHVSMSKNSXQPYCVTRRLVTK-PXRIMGYGRAVARIPR 299
VH ++ KN+ QPY V+ + G GRAVARIPR
Sbjct: 40 VHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 78
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVN 181
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
Score = 33.9 bits (74), Expect = 0.094
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 VHVSMSKNSXQPYCVTRRLVTK-PXRIMGYGRAVARIPR 299
VH ++ KN+ QPY V+ + G GRAVARIPR
Sbjct: 40 VHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 78
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVN 181
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
Score = 33.9 bits (74), Expect = 0.094
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 VHVSMSKNSXQPYCVTRRLVTK-PXRIMGYGRAVARIPR 299
VH ++ KN+ QPY V+ + G GRAVARIPR
Sbjct: 40 VHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 78
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVN 181
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
Score = 33.9 bits (74), Expect = 0.094
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 VHVSMSKNSXQPYCVTRRLVTK-PXRIMGYGRAVARIPR 299
VH ++ KN+ QPY V+ + G GRAVARIPR
Sbjct: 40 VHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 78
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVN 181
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
Score = 33.9 bits (74), Expect = 0.094
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 VHVSMSKNSXQPYCVTRRLVTK-PXRIMGYGRAVARIPR 299
VH ++ KN+ QPY V+ + G GRAVARIPR
Sbjct: 40 VHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 78
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVN 181
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
Score = 33.9 bits (74), Expect = 0.094
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 VHVSMSKNSXQPYCVTRRLVTK-PXRIMGYGRAVARIPR 299
VH ++ KN+ QPY V+ + G GRAVARIPR
Sbjct: 40 VHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 78
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVN 181
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
Score = 33.9 bits (74), Expect = 0.094
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 VHVSMSKNSXQPYCVTRRLVTK-PXRIMGYGRAVARIPR 299
VH ++ KN+ QPY V+ + G GRAVARIPR
Sbjct: 40 VHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 78
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVN 181
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
Score = 33.9 bits (74), Expect = 0.094
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 VHVSMSKNSXQPYCVTRRLVTK-PXRIMGYGRAVARIPR 299
VH ++ KN+ QPY V+ + G GRAVARIPR
Sbjct: 40 VHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 78
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVN 181
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
Score = 33.9 bits (74), Expect = 0.094
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 VHVSMSKNSXQPYCVTRRLVTK-PXRIMGYGRAVARIPR 299
VH ++ KN+ QPY V+ + G GRAVARIPR
Sbjct: 40 VHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 78
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVN 181
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
Score = 33.9 bits (74), Expect = 0.094
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 VHVSMSKNSXQPYCVTRRLVTK-PXRIMGYGRAVARIPR 299
VH ++ KN+ QPY V+ + G GRAVARIPR
Sbjct: 40 VHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 78
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVN 181
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
Score = 33.9 bits (74), Expect = 0.094
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 VHVSMSKNSXQPYCVTRRLVTK-PXRIMGYGRAVARIPR 299
VH ++ KN+ QPY V+ + G GRAVARIPR
Sbjct: 40 VHANLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 78
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +2
Query: 65 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVN 181
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVN 38
Score = 33.9 bits (74), Expect = 0.094
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 VHVSMSKNSXQPYCVTRRLVTK-PXRIMGYGRAVARIPR 299
VH ++ KN+ QPY V+ + G GRAVARIPR
Sbjct: 40 VHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 78
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +1
Query: 112 DGAGCSQAPPVRIQGAHTSG-PGQWMSTFLCPRT 210
D CS Q +H G PG W + LCP+T
Sbjct: 261 DTCVCSTVAEFSRQCSHAGGRPGNWRTATLCPKT 294
>BC014214-1|AAH14214.1| 982|Homo sapiens AP2A1 protein protein.
Length = 982
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 115 GAGCSQAPPVRIQGAHTSGPGQWMSTFLCPRTRXSP 222
G G PP Q GPG+WMS L P +P
Sbjct: 935 GLGGVPLPPFPPQAQRGEGPGKWMSPPLPPHPVVAP 970
>X69490-1|CAA49245.1| 4650|Homo sapiens titin protein.
Length = 4650
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 122 PAPSHSSLNTPTLKVGLPIDSFRYFSEAIPPKYT 21
P PSH +PT PI+ ++ + PPK T
Sbjct: 3915 PEPSHPKAVSPTETKPTPIEKVQHLPVSAPPKIT 3948
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,840,426
Number of Sequences: 237096
Number of extensions: 844713
Number of successful extensions: 1501
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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