Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0257
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 157 7e-39
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 156 1e-38
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 156 1e-38
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 156 1e-38
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 156 1e-38
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 155 2e-38
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 155 2e-38
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 154 5e-38
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 153 6e-38
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 95 3e-20
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 95 4e-20
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 95 4e-20
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 88 5e-18
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 88 5e-18
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 88 5e-18
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 88 5e-18
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 63 2e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 63 2e-10
At3g21720.1 68416.m02740 isocitrate lyase, putative similar to i... 31 0.58
At3g21420.1 68416.m02703 oxidoreductase, 2OG-Fe(II) oxygenase fa... 30 1.0
At1g44900.1 68414.m05144 DNA replication licensing factor, putat... 27 7.2
At5g37320.1 68418.m04482 hypothetical protein contains Pfam prof... 27 9.5
At5g10530.1 68418.m01219 lectin protein kinase, putative similar... 27 9.5
At2g20710.2 68415.m02432 pentatricopeptide (PPR) repeat-containi... 27 9.5
At2g20710.1 68415.m02431 pentatricopeptide (PPR) repeat-containi... 27 9.5
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 27 9.5
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 157 bits (380), Expect = 7e-39
Identities = 69/87 (79%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAMFRGK 320
Score = 156 bits (378), Expect = 1e-38
Identities = 68/85 (80%), Positives = 77/85 (90%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K VCDIPP GLKMASTFIGN+T+IQ +
Sbjct: 318 RGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEM 377
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGEG 507
F+RVSEQF AMFRRKAFLHWYTGEG
Sbjct: 378 FRRVSEQFTAMFRRKAFLHWYTGEG 402
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/34 (76%), Positives = 28/34 (82%), Gaps = 3/34 (8%)
Frame = +3
Query: 486 ALVHW*---G*DEMEFTEAESNMNDLISEYQQYQ 578
A +HW G DEMEFTEAESNMNDL+SEYQQYQ
Sbjct: 393 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 156 bits (378), Expect = 1e-38
Identities = 68/85 (80%), Positives = 77/85 (90%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K VCDIPP GLKMASTFIGN+T+IQ +
Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEM 377
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGEG 507
F+RVSEQF AMFRRKAFLHWYTGEG
Sbjct: 378 FRRVSEQFTAMFRRKAFLHWYTGEG 402
Score = 154 bits (374), Expect = 4e-38
Identities = 67/87 (77%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYR+LTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+D+KNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDSKNMMCAADPRHGRYLTASAMFRGK 320
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/34 (76%), Positives = 28/34 (82%), Gaps = 3/34 (8%)
Frame = +3
Query: 486 ALVHW*---G*DEMEFTEAESNMNDLISEYQQYQ 578
A +HW G DEMEFTEAESNMNDL+SEYQQYQ
Sbjct: 393 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 156 bits (378), Expect = 1e-38
Identities = 68/85 (80%), Positives = 77/85 (90%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K VCDIPP GLKMASTFIGN+T+IQ +
Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEM 377
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGEG 507
F+RVSEQF AMFRRKAFLHWYTGEG
Sbjct: 378 FRRVSEQFTAMFRRKAFLHWYTGEG 402
Score = 154 bits (374), Expect = 4e-38
Identities = 67/87 (77%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYR+LTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+D+KNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDSKNMMCAADPRHGRYLTASAMFRGK 320
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/34 (76%), Positives = 28/34 (82%), Gaps = 3/34 (8%)
Frame = +3
Query: 486 ALVHW*---G*DEMEFTEAESNMNDLISEYQQYQ 578
A +HW G DEMEFTEAESNMNDL+SEYQQYQ
Sbjct: 393 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 156 bits (378), Expect = 1e-38
Identities = 68/85 (80%), Positives = 77/85 (90%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K VCDIPP GLKMASTFIGN+T+IQ +
Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEM 377
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGEG 507
F+RVSEQF AMFRRKAFLHWYTGEG
Sbjct: 378 FRRVSEQFTAMFRRKAFLHWYTGEG 402
Score = 154 bits (374), Expect = 4e-38
Identities = 68/87 (78%), Positives = 78/87 (89%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYR LTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAMFRGK 320
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/34 (76%), Positives = 28/34 (82%), Gaps = 3/34 (8%)
Frame = +3
Query: 486 ALVHW*---G*DEMEFTEAESNMNDLISEYQQYQ 578
A +HW G DEMEFTEAESNMNDL+SEYQQYQ
Sbjct: 393 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 156 bits (378), Expect = 1e-38
Identities = 67/85 (78%), Positives = 79/85 (92%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+G+MS KEVDEQ+ NIQNKNS+YFVEWIPNN K +VCDIPP+GLKMA+TF+GN+T+IQ +
Sbjct: 319 RGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMAATFVGNSTSIQEM 378
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGEG 507
F+RVSEQF AMFRRKAFLHWYTGEG
Sbjct: 379 FRRVSEQFTAMFRRKAFLHWYTGEG 403
Score = 149 bits (360), Expect = 2e-36
Identities = 66/87 (75%), Positives = 77/87 (88%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T LRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY +LTVPELT QM
Sbjct: 235 SGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 294
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+D+KNMM A DPRHGRYLT + IFRG+
Sbjct: 295 WDSKNMMCAADPRHGRYLTASAIFRGQ 321
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/34 (73%), Positives = 28/34 (82%), Gaps = 3/34 (8%)
Frame = +3
Query: 486 ALVHW*---G*DEMEFTEAESNMNDLISEYQQYQ 578
A +HW G DEMEFTEAESNMNDL++EYQQYQ
Sbjct: 394 AFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 427
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 155 bits (377), Expect = 2e-38
Identities = 68/87 (78%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+D+KNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDSKNMMCAADPRHGRYLTASAMFRGK 320
Score = 153 bits (372), Expect = 6e-38
Identities = 67/85 (78%), Positives = 77/85 (90%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDI PRGL MASTFIGN+T+IQ +
Sbjct: 318 RGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGLSMASTFIGNSTSIQEM 377
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGEG 507
F+RVSEQF AMFRRKAFLHWYTGEG
Sbjct: 378 FRRVSEQFTAMFRRKAFLHWYTGEG 402
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/34 (76%), Positives = 28/34 (82%), Gaps = 3/34 (8%)
Frame = +3
Query: 486 ALVHW*---G*DEMEFTEAESNMNDLISEYQQYQ 578
A +HW G DEMEFTEAESNMNDL+SEYQQYQ
Sbjct: 393 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 155 bits (376), Expect = 2e-38
Identities = 66/85 (77%), Positives = 78/85 (91%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDIPP G+KMASTF+GN+T+IQ +
Sbjct: 319 RGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPTGIKMASTFVGNSTSIQEM 378
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGEG 507
F+RVSEQF AMFRRKAFLHWYTGEG
Sbjct: 379 FRRVSEQFTAMFRRKAFLHWYTGEG 403
Score = 148 bits (359), Expect = 2e-36
Identities = 66/87 (75%), Positives = 77/87 (88%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T LRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY +LTVPELT QM
Sbjct: 235 SGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 294
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 295 WDAKNMMCAADPRHGRYLTASAMFRGK 321
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/34 (76%), Positives = 28/34 (82%), Gaps = 3/34 (8%)
Frame = +3
Query: 486 ALVHW*---G*DEMEFTEAESNMNDLISEYQQYQ 578
A +HW G DEMEFTEAESNMNDL+SEYQQYQ
Sbjct: 394 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 427
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 154 bits (373), Expect = 5e-38
Identities = 69/105 (65%), Positives = 84/105 (80%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY AL+VPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTKTA 316
+DAKNMM A DPRHGRYLT + +FRG+ K++ + K +
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNS 338
Score = 153 bits (372), Expect = 6e-38
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+G++S KEVDEQ+ NIQNKNS+YFVEWIPNN K +VCDI P+GLKMASTFIGN+T+IQ +
Sbjct: 318 RGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVCDIAPKGLKMASTFIGNSTSIQEM 377
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGEG 507
F+RVSEQF AMFRRKAFLHWYTGEG
Sbjct: 378 FRRVSEQFTAMFRRKAFLHWYTGEG 402
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/34 (73%), Positives = 28/34 (82%), Gaps = 3/34 (8%)
Frame = +3
Query: 486 ALVHW*---G*DEMEFTEAESNMNDLISEYQQYQ 578
A +HW G DEMEFTEAESNMNDL++EYQQYQ
Sbjct: 393 AFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 426
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 153 bits (372), Expect = 6e-38
Identities = 67/87 (77%), Positives = 78/87 (89%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY AL+VPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAVFRGK 320
Score = 153 bits (371), Expect = 9e-38
Identities = 67/85 (78%), Positives = 77/85 (90%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDI P GLKMASTFIGN+T+IQ +
Sbjct: 318 RGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIAPTGLKMASTFIGNSTSIQEM 377
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGEG 507
F+RVSEQF AMFRRKAFLHWYTGEG
Sbjct: 378 FRRVSEQFTAMFRRKAFLHWYTGEG 402
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/34 (73%), Positives = 28/34 (82%), Gaps = 3/34 (8%)
Frame = +3
Query: 486 ALVHW*---G*DEMEFTEAESNMNDLISEYQQYQ 578
A +HW G DEMEFTEAESNMNDL++EYQQYQ
Sbjct: 393 AFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 426
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 95.1 bits (226), Expect = 3e-20
Identities = 37/95 (38%), Positives = 59/95 (62%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +TT LRF G +N D+ + N+VP+PR+HF +AP+ S + +VPE+T +
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSV 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTS 286
F+ NMM CDPRHG+Y+ ++RG+ + K + +
Sbjct: 296 FEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNT 330
Score = 60.9 bits (141), Expect = 6e-10
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 396
C +G + K+V+ +A I+ K + FV+W P K + PP ++ A
Sbjct: 316 CLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAV 375
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGEG 507
I N TA+ +F R+ +F M+ ++AF+HWY GEG
Sbjct: 376 CMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEG 412
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 94.7 bits (225), Expect = 4e-20
Identities = 39/103 (37%), Positives = 63/103 (61%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +TT LRF G +N D+ + N+VP+PR+HF +AP+ S + L+VPE+T +
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAV 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 61.3 bits (142), Expect = 5e-10
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 396
C +G + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAV 375
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGEG 507
I N TA+ +F R+ +F M+ ++AF+HWY GEG
Sbjct: 376 CMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 412
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 94.7 bits (225), Expect = 4e-20
Identities = 39/103 (37%), Positives = 63/103 (61%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +TT LRF G +N D+ + N+VP+PR+HF +AP+ S + L+VPE+T +
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAV 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 61.3 bits (142), Expect = 5e-10
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 396
C +G + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAV 375
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGEG 507
I N TA+ +F R+ +F M+ ++AF+HWY GEG
Sbjct: 376 CMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 412
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 87.8 bits (208), Expect = 5e-18
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 396
C +G + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAV 375
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGEG 507
I N+T++ +F R+ +F M+ ++AF+HWY GEG
Sbjct: 376 CMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 412
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 87.8 bits (208), Expect = 5e-18
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ + I+ K + FV+W P K + PP
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPP 360
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 87.8 bits (208), Expect = 5e-18
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 396
C +G + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAV 375
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGEG 507
I N+T++ +F R+ +F M+ ++AF+HWY GEG
Sbjct: 376 CMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 412
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 87.8 bits (208), Expect = 5e-18
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 396
C +G + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAV 375
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGEG 507
I N+T++ +F R+ +F M+ ++AF+HWY GEG
Sbjct: 376 CMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 412
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLT-SRGAQQYRALTVPELTLQ 178
S TT LR+PG +N DL L +++P PR HF G+ PLT R A R TV ++ +
Sbjct: 237 SASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRR 296
Query: 179 MFDAKNMMVACDPRH-----GRYLTVATIFRGE 262
+ KN+MV+ R+ +Y+++ I +GE
Sbjct: 297 LLQTKNIMVSSYARNKEASQAKYISILNIIQGE 329
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/129 (21%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Frame = +1
Query: 118 ADVARSSTVSSFNCTRADAANVRRQKHDGRV*SSTREVFDRCDDIQGRMSMKEVDEQLAN 297
A+V R +TV N+ + +S + + IQG + +V E L
Sbjct: 282 ANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQR 341
Query: 298 IQNKNSTYFVEWIPNNCKIAVCDIPP---RGLKMASTFIGNTTAIQTIFKRVSEQFVAMF 468
I+ + F++W P + ++A+ P +++ + + T+I+ +F R Q+ +
Sbjct: 342 IRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGLMLASHTSIRHLFSRCLSQYDKLR 401
Query: 469 RRKAFLHWY 495
+++AFL Y
Sbjct: 402 KKQAFLDNY 410
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLT-SRGAQQYRALTVPELTLQ 178
S TT LR+PG +N DL L +++P PR HF G+ PLT R A R TV ++ +
Sbjct: 237 SASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRR 296
Query: 179 MFDAKNMMVACDPRH-----GRYLTVATIFRGE 262
+ KN+MV+ R+ +Y+++ I +GE
Sbjct: 297 LLQTKNIMVSSYARNKEASQAKYISILNIIQGE 329
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/129 (21%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Frame = +1
Query: 118 ADVARSSTVSSFNCTRADAANVRRQKHDGRV*SSTREVFDRCDDIQGRMSMKEVDEQLAN 297
A+V R +TV N+ + +S + + IQG + +V E L
Sbjct: 282 ANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQR 341
Query: 298 IQNKNSTYFVEWIPNNCKIAVCDIPP---RGLKMASTFIGNTTAIQTIFKRVSEQFVAMF 468
I+ + F+EW P + ++A+ P +++ + + T+I+ +F + Q+ +
Sbjct: 342 IRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYDKLR 401
Query: 469 RRKAFLHWY 495
+++AFL Y
Sbjct: 402 KKQAFLDNY 410
>At3g21720.1 68416.m02740 isocitrate lyase, putative similar to
isocitrate lyase GI:167144 from [Brassica napus]
Length = 576
Score = 31.1 bits (67), Expect = 0.58
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 265 TFAPEYRRNGQIPPVSRITRDHHVFGVEHLQRQ 167
TFA +Y R G + V RI R+ GV+ L Q
Sbjct: 485 TFAKDYARRGMLAYVERIQREERTHGVDTLAHQ 517
>At3g21420.1 68416.m02703 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to SP|Q9ZWQ9 Flavonol synthase
(EC 1.14.11.-) {Citrus unshiu}; contains Pfam profile
PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family
Length = 364
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 106 RGVEMQARKRHHVHSQLPQISVQLSRKP 23
RGV + + K HH+H Q+P I + KP
Sbjct: 39 RGVVVSSLKTHHLHHQIPVIDLSKLSKP 66
>At1g44900.1 68414.m05144 DNA replication licensing factor, putative
similar to DNA replication licensing factor MCM2 from
{Xenopus laevis} SP|P55861, SP|P49736 {Homo sapiens};
contains Pfam profile PF00493: MCM2/3/5 family
Length = 928
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 205 RV*SSTREVFDRCDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAV 360
R+ + RE R D+++ ++ K D L ++ KN +E++PN C + +
Sbjct: 200 RIQGTLREWVMR-DEVRRFIAKKFKDFLLTYVKPKNENGDIEYVPNKCSLEI 250
>At5g37320.1 68418.m04482 hypothetical protein contains Pfam profile
PF05056: Protein of unknown function (DUF674)
Length = 485
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 533 CLRELHFILPSPVYQCKKAFRLNIATNCSDTLLNMVCMAVVLPM 402
C L +L VY K+ + I C + ++++CM +VLP+
Sbjct: 263 CDSVLGQVLSFKVYLSKEDNKKVIYAECGEGFIDLLCMFLVLPL 306
>At5g10530.1 68418.m01219 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains protein kinase domain,
Pfam:PF00069; contains legume lectins alpha and beta
domains, Pfam:PF00138 and Pfam:PF00139
Length = 651
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 255 LNIVATVKYLPCRGSHATIMFLASNICSVSSG 160
LN+ A V +LP + AT +SN SVSSG
Sbjct: 607 LNLEAPVPHLPTKMPVATYHVSSSNTTSVSSG 638
>At2g20710.2 68415.m02432 pentatricopeptide (PPR) repeat-containing
protein low similarity to DNA-binding protein [Triticum
aestivum] GI:6958202; contains Pfam profile PF01535: PPR
repeat
Length = 395
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 278 LTSNWRIFRTKTARILSSGYPITARLPCVTYLRGVLKWLRPSLVTRRPYRPY 433
L WR+ T T L+ GY + ++ + V KW R V++ +RP+
Sbjct: 281 LVQKWRVEDTSTWERLALGYKMAGKME-----KAVEKWKRAIEVSKPGWRPH 327
>At2g20710.1 68415.m02431 pentatricopeptide (PPR) repeat-containing
protein low similarity to DNA-binding protein [Triticum
aestivum] GI:6958202; contains Pfam profile PF01535: PPR
repeat
Length = 490
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 278 LTSNWRIFRTKTARILSSGYPITARLPCVTYLRGVLKWLRPSLVTRRPYRPY 433
L WR+ T T L+ GY + ++ + V KW R V++ +RP+
Sbjct: 376 LVQKWRVEDTSTWERLALGYKMAGKME-----KAVEKWKRAIEVSKPGWRPH 422
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 513 EMEFTEAESNMNDLISEYQQYQGR 584
E +AE N++D+ISE ++ QGR
Sbjct: 940 EAALMQAERNISDIISEKEEAQGR 963
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,503,384
Number of Sequences: 28952
Number of extensions: 283132
Number of successful extensions: 868
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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