Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0255
         (399 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S80335-1|AAB21332.1|  798|Homo sapiens integrin beta 7 subunit p...    29   5.7  
S49378-1|AAB23688.1|  798|Homo sapiens integrin beta 7 subunit p...    29   5.7  
M68892-1|AAA59184.1|  798|Homo sapiens integrin beta-7 subunit p...    29   5.7  
M62880-1|AAA59185.1|  798|Homo sapiens integrin beta-7 subunit p...    29   5.7  
L23823-1|AAA36118.1|  798|Homo sapiens integrin beta 7 subunit p...    29   5.7  
BC015916-1|AAH15916.1|  798|Homo sapiens ITGB7 protein protein.        29   5.7  

>S80335-1|AAB21332.1|  798|Homo sapiens integrin beta 7 subunit
           protein.
          Length = 798

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 67  GASSCISGKXGRRC-CNIWHWGSVDSISGSRARFQLSG-NSGRKHSRC 204
           G  SC  G+ GR C C++    S D  SG RA        SG+ H +C
Sbjct: 498 GVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQC 545


>S49378-1|AAB23688.1|  798|Homo sapiens integrin beta 7 subunit
           protein.
          Length = 798

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 67  GASSCISGKXGRRC-CNIWHWGSVDSISGSRARFQLSG-NSGRKHSRC 204
           G  SC  G+ GR C C++    S D  SG RA        SG+ H +C
Sbjct: 498 GVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQC 545


>M68892-1|AAA59184.1|  798|Homo sapiens integrin beta-7 subunit
           protein.
          Length = 798

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 67  GASSCISGKXGRRC-CNIWHWGSVDSISGSRARFQLSG-NSGRKHSRC 204
           G  SC  G+ GR C C++    S D  SG RA        SG+ H +C
Sbjct: 498 GVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQC 545


>M62880-1|AAA59185.1|  798|Homo sapiens integrin beta-7 subunit
           protein.
          Length = 798

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 67  GASSCISGKXGRRC-CNIWHWGSVDSISGSRARFQLSG-NSGRKHSRC 204
           G  SC  G+ GR C C++    S D  SG RA        SG+ H +C
Sbjct: 498 GVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQC 545


>L23823-1|AAA36118.1|  798|Homo sapiens integrin beta 7 subunit
           protein.
          Length = 798

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 67  GASSCISGKXGRRC-CNIWHWGSVDSISGSRARFQLSG-NSGRKHSRC 204
           G  SC  G+ GR C C++    S D  SG RA        SG+ H +C
Sbjct: 498 GVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQC 545


>BC015916-1|AAH15916.1|  798|Homo sapiens ITGB7 protein protein.
          Length = 798

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 67  GASSCISGKXGRRC-CNIWHWGSVDSISGSRARFQLSG-NSGRKHSRC 204
           G  SC  G+ GR C C++    S D  SG RA        SG+ H +C
Sbjct: 498 GVCSCAPGRLGRLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQC 545


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,050,389
Number of Sequences: 237096
Number of extensions: 923229
Number of successful extensions: 5274
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5274
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)