Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0254
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119558-1|AAM50212.1|  138|Drosophila melanogaster GM01181p pro...    85   5e-17
AE014134-2589|AAF53452.1|  138|Drosophila melanogaster CG15261-P...    85   5e-17
BT021411-1|AAX33559.1|  901|Drosophila melanogaster LD05643p pro...    28   7.2  
AY119604-1|AAM50258.1|  901|Drosophila melanogaster LD28359p pro...    28   7.2  
AE014298-1693|AAF48097.3|  901|Drosophila melanogaster CG1578-PA...    28   7.2  

>AY119558-1|AAM50212.1|  138|Drosophila melanogaster GM01181p
           protein.
          Length = 138

 Score = 85.4 bits (202), Expect = 5e-17
 Identities = 41/99 (41%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
 Frame = +2

Query: 254 ITSPEIYQPVGPYSQAILAXKTLYISGILGLDRDA-QMVCGGAEAQTRQALDNLRHVLEA 430
           I++    +PV PY+QA++A +T+Y+SG LGLD+D  ++V GG   Q ++AL+NL  VL+A
Sbjct: 9   ISTANAAKPVAPYNQAVVADRTVYVSGCLGLDKDTMKLVPGGPTEQAQKALENLEAVLKA 68

Query: 431 GGASLESVVKTTVLLASMDDFQTFNKSMAEYFPKACPAR 547
             + ++ V+K TV L  ++DF   N+     F K  PAR
Sbjct: 69  ADSGVDKVIKNTVFLKDLNDFGAVNEVYKRVFNKDFPAR 107


>AE014134-2589|AAF53452.1|  138|Drosophila melanogaster CG15261-PA
           protein.
          Length = 138

 Score = 85.4 bits (202), Expect = 5e-17
 Identities = 41/99 (41%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
 Frame = +2

Query: 254 ITSPEIYQPVGPYSQAILAXKTLYISGILGLDRDA-QMVCGGAEAQTRQALDNLRHVLEA 430
           I++    +PV PY+QA++A +T+Y+SG LGLD+D  ++V GG   Q ++AL+NL  VL+A
Sbjct: 9   ISTANAAKPVAPYNQAVVADRTVYVSGCLGLDKDTMKLVPGGPTEQAQKALENLEAVLKA 68

Query: 431 GGASLESVVKTTVLLASMDDFQTFNKSMAEYFPKACPAR 547
             + ++ V+K TV L  ++DF   N+     F K  PAR
Sbjct: 69  ADSGVDKVIKNTVFLKDLNDFGAVNEVYKRVFNKDFPAR 107


>BT021411-1|AAX33559.1|  901|Drosophila melanogaster LD05643p
           protein.
          Length = 901

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 281 VGPYSQAILAXKTLYISGILGLDRDAQMVC-GGAEAQTRQALDNLRHVLEAGGA 439
           +GPYSQ+       YISG + L   +  +  GG   Q +  L ++  + +A  A
Sbjct: 607 IGPYSQSTRIGDITYISGQIALVPGSMTIIEGGIRPQCKLTLRHISRIAKAMNA 660


>AY119604-1|AAM50258.1|  901|Drosophila melanogaster LD28359p
           protein.
          Length = 901

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 281 VGPYSQAILAXKTLYISGILGLDRDAQMVC-GGAEAQTRQALDNLRHVLEAGGA 439
           +GPYSQ+       YISG + L   +  +  GG   Q +  L ++  + +A  A
Sbjct: 607 IGPYSQSTRIGDITYISGQIALVPGSMTIIEGGIRPQCKLTLRHISRIAKAMNA 660


>AE014298-1693|AAF48097.3|  901|Drosophila melanogaster CG1578-PA
           protein.
          Length = 901

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 281 VGPYSQAILAXKTLYISGILGLDRDAQMVC-GGAEAQTRQALDNLRHVLEAGGA 439
           +GPYSQ+       YISG + L   +  +  GG   Q +  L ++  + +A  A
Sbjct: 607 IGPYSQSTRIGDITYISGQIALVPGSMTIIEGGIRPQCKLTLRHISRIAKAMNA 660


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,565,389
Number of Sequences: 53049
Number of extensions: 488603
Number of successful extensions: 1390
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)