Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0253
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 182 1e-46
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 182 2e-46
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 179 2e-45
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 161 3e-40
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 137 7e-33
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 3e-22
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 101 4e-22
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 101 4e-22
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 100 8e-22
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 1e-21
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 99 3e-21
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 5e-20
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 3e-19
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 72 4e-13
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 7e-12
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 65 4e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 60 2e-09
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 59 3e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 49 3e-06
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 42 5e-04
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 41 7e-04
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 30 1.6
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 2.2
SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29) 29 2.9
SB_47545| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09) 28 5.0
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_46614| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 182 bits (444), Expect = 1e-46
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEA+GGKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY
Sbjct: 260 INVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 319
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAELVDSVLDVVRKEAE CDCL+ F
Sbjct: 320 TEGAELVDSVLDVVRKEAESCDCLQGF 346
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 258
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 182 bits (443), Expect = 2e-46
Identities = 81/87 (93%), Positives = 85/87 (97%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 INVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAELVDSVLDVVRKEAE CDCL+ F
Sbjct: 107 TEGAELVDSVLDVVRKEAESCDCLQGF 133
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 179 bits (435), Expect = 2e-45
Identities = 78/87 (89%), Positives = 85/87 (97%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEA+GGKYVPR+V++DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 INVYYNEATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAEL+DSVLDVVRKEAE CDC++ F
Sbjct: 107 TEGAELMDSVLDVVRKEAESCDCIQGF 133
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIV +QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 161 bits (392), Expect = 3e-40
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = +2
Query: 287 GKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 466
GKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 467 LDVVRKEAEGCDCLRVF 517
LDVVRKEAE CDC++ F
Sbjct: 62 LDVVRKEAESCDCIQGF 78
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 137 bits (331), Expect = 7e-33
Identities = 55/77 (71%), Positives = 69/77 (89%)
Frame = +2
Query: 281 SGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 460
+GG+YVPR+++VDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 461 SVLDVVRKEAEGCDCLR 511
++ DV+RKEAE CDC++
Sbjct: 71 NIFDVLRKEAENCDCMQ 87
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 102 bits (244), Expect = 3e-22
Identities = 43/88 (48%), Positives = 62/88 (70%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 48 SFNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E++D+VLD +RK A+GC L+ F
Sbjct: 108 YTVGKEMIDTVLDRLRKLADGCTGLQGF 135
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 101 bits (242), Expect = 4e-22
Identities = 45/88 (51%), Positives = 61/88 (69%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GH
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E+VD VLD +RK A+ C L+ F
Sbjct: 108 YTVGKEIVDLVLDRIRKLADQCTGLQGF 135
Score = 101 bits (241), Expect = 6e-22
Identities = 44/88 (50%), Positives = 61/88 (69%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 481 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 540
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E+VD VLD +RK A+ C L+ F
Sbjct: 541 YTVGKEIVDLVLDRIRKLADQCTGLQGF 568
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 475
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 101 bits (242), Expect = 4e-22
Identities = 44/88 (50%), Positives = 61/88 (69%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 633 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 692
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G EL+D VLD +RK A+ C L+ F
Sbjct: 693 YTVGKELIDLVLDRIRKLADQCTGLQGF 720
Score = 100 bits (240), Expect = 8e-22
Identities = 44/88 (50%), Positives = 61/88 (69%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 112 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 171
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E+VD VLD +RK A+ C L+ F
Sbjct: 172 YTIGKEIVDLVLDRIRKLADQCTGLQGF 199
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSV 346
S N +++E GK+VPRAV VDLEP + +
Sbjct: 560 SFNTFFSETGAGKHVPRAVFVDLEPTVRECI 590
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 117 IMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
+ RE + + GQ G QIG WE+ EHGI G D +
Sbjct: 64 LQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 106
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
+RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 627
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 554
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 100 bits (240), Expect = 8e-22
Identities = 43/88 (48%), Positives = 61/88 (69%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 47 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 106
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E++D VLD +RK A+ C L+ F
Sbjct: 107 YTVGKEIIDLVLDRIRKLADQCTGLQGF 134
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 41
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 99 bits (238), Expect = 1e-21
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 394
INVYYNEA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 47 INVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 99.5 bits (237), Expect = 2e-21
Identities = 41/88 (46%), Positives = 61/88 (69%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 466 SFNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGH 525
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G + +D+VLD +RK A+ C L+ F
Sbjct: 526 YTVGKDHIDNVLDRIRKLADQCSGLQGF 553
Score = 95.9 bits (228), Expect = 2e-20
Identities = 41/88 (46%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 33 SFNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 92
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G +L++ VLD +RK A+ C L+ F
Sbjct: 93 YTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE V I GQ G Q+G WE+ EHGI G D +
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 460
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 99.1 bits (236), Expect = 2e-21
Identities = 43/88 (48%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
+ N ++ E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 419 AFNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 478
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E +D VLD +RK A+GC L+ F
Sbjct: 479 YTVGKEQIDIVLDRLRKLADGCTGLQGF 506
Score = 99.1 bits (236), Expect = 2e-21
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 852 SFNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 911
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E++D VLD +RK A+ C L+ F
Sbjct: 912 YTVGKEMIDLVLDRIRKLADQCTGLQGF 939
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 413
Score = 35.1 bits (77), Expect = 0.043
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 846
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 98.7 bits (235), Expect = 3e-21
Identities = 43/88 (48%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E++D VLD RK A+ C L+ F
Sbjct: 108 YTIGKEIIDLVLDRCRKLADQCTGLQGF 135
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + I GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 94.7 bits (225), Expect = 5e-20
Identities = 41/88 (46%), Positives = 58/88 (65%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N ++ E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 13 SFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGH 72
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E +D LD +RK A+ C L+ F
Sbjct: 73 YTVGKEHIDLALDRIRKLADQCTGLQGF 100
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 92.3 bits (219), Expect = 3e-19
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +2
Query: 272 NEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 451
+EA+ GKYVPRAV+VDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 452 LVDSVLDVVRKEAEGCDCLRVF 517
+V+ V+D +RK + C L+ F
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGF 1046
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 71.7 bits (168), Expect = 4e-13
Identities = 37/88 (42%), Positives = 51/88 (57%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP + P+ + G+ A NN+A+GH
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGH 97
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G + VD VLD +RK A+ C L+ F
Sbjct: 98 YTIGKQQVDQVLDRLRKLADQCSGLQGF 125
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 236
MRE + I GQ G QIG WE+ EHGI G D
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD 39
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +2
Query: 338 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLRVF 517
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C L+ F
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLRVF 517
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C L+ F
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 484
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLRVF 517
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C L+ F
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +2
Query: 398 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLRVF 517
Q+ A NNWAKG YTEGAEL+DS +D +RK AE CD ++ F
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGF 41
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 484
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +2
Query: 302 RAVMVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLD 472
RAV +D+E + S G P F Q G+GNNWA G G + +D VLD
Sbjct: 67 RAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLD 126
Query: 473 VVRKEAEGCDCLRVF 517
+V++E E CD L F
Sbjct: 127 LVQREVEKCDRLDGF 141
Score = 31.9 bits (69), Expect = 0.40
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 129 IVHIQAGQCGNQIGAKFWEVISDE 200
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +2
Query: 302 RAVMVDLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVD 460
R V VD E + S R G GQ R N + G+ G GNN+A G++ G L+
Sbjct: 40 RCVCVDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLH 98
Query: 461 SVLDVVRKEAEGCD 502
+D +RKE E CD
Sbjct: 99 MTMDAMRKEVERCD 112
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVR 349
S N +++E GGK+VPRAV VDLEP + ++
Sbjct: 48 SFNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + + GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 302 RAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 421
RAV++D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLEASMST 269
MRE + I GQ G QIG WE+ EHGI G D + + S ST
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFST 246
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 30.7 bits (66), Expect = 0.93
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 177 FWEVISDEHGIDATG 221
FWEVI++EHGID G
Sbjct: 1 FWEVIAEEHGIDPDG 15
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/53 (41%), Positives = 24/53 (45%)
Frame = -3
Query: 464 PNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQ 306
P+Q VQ PL L P Y PP V TA R P Q QGPP+Q
Sbjct: 1080 PHQAVQQPLPQQLPPQYRPPAIV------------TAAVARPP--QVQGPPTQ 1118
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -2
Query: 408 APDCPKTKLSGRKICPNGPERTESMVPGSRSTITAR----GTYLP 286
A DCP ++ +GR +CP P +S + ++++I GT+ P
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKASIEVNDFTLGTHTP 182
>SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29)
Length = 190
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 198 EHGIDATGAYSGDSDLQLEASMSTITK 278
+HG+ TG + GDSD +L+A++ +K
Sbjct: 137 DHGMTRTGDHGGDSDDELDAALFVYSK 163
>SB_47545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 406
Score = 28.7 bits (61), Expect = 3.8
Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 17/121 (14%)
Frame = -1
Query: 598 LDTLHGFWKSKESPYQIQ----------------YLLPENELAENPQTIAAFCFFSNYIQ 467
L ++HG KSK +PY Q LP ++ P + CF N
Sbjct: 149 LCSVHGLKKSKTTPYHTQGNGLCERLNRTLHELLRTLPPDKKRRWPDHLRQLCFAYNATS 208
Query: 466 YRINQFSPLCVMSFRPVIPRPRLSEDEVVRSEDLPKRPGTDGV-HGSRLKVHHHSSRDVL 290
+ +SP VM R P+L D ++ E+ +P T H L+ H + L
Sbjct: 209 HSTTGYSPFFVMYERD----PKLHIDRLIGEEETMDKPDTWVTRHTKELRKAHRRAAKRL 264
Query: 289 A 287
A
Sbjct: 265 A 265
>SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09)
Length = 549
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -1
Query: 526 ELAENPQTIAAFCFFSNYIQYRINQFSPLCVMSFRPVIPRPRLSEDEVVRSEDL 365
EL + + A+C +++ R N P + +F+P P RLSE E+VR DL
Sbjct: 386 ELNTDQRVYLAWCIL--FVETRGN---PKSLKAFQPFWPAIRLSELELVRRSDL 434
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 399 CPKTKLSGRKICPNGPERTESMVPGSRSTITARGTYLPPEA 277
CP+ + RK P+G + + G+ S + ++G +PP A
Sbjct: 456 CPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 904
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 452 VQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRS-PWFQAQGPPSQL 303
V PP+C+ L S P S A+ A++G + W + + P +QL
Sbjct: 193 VHPPICDCLGCRISSPVVASPESIREAFEAENAKDGNADDWGEVKTPTNQL 243
>SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 476 LHPVPNQPVQPPLCNVLSPSYSPP 405
L PVP+ P Q P +P+++PP
Sbjct: 476 LDPVPSAPTQAPTPTPAAPTHAPP 499
>SB_46614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 190 SRTSTALTPRVLTAATPTCSLKHQCLL*RSFRGQVRPASC 309
++ S LT L A P KH+C + + +G +R ASC
Sbjct: 181 TKQSRKLTFIALCATHPRNVAKHRCDIDKGHQGSLRKASC 220
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,269,535
Number of Sequences: 59808
Number of extensions: 412551
Number of successful extensions: 1140
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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