Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0253
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 183 1e-46
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 178 2e-45
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 178 3e-45
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 178 3e-45
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 170 7e-43
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 170 7e-43
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 112 2e-25
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 112 2e-25
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 104 6e-23
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 98 4e-21
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 96 1e-20
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 96 1e-20
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 96 1e-20
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 96 1e-20
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 96 2e-20
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 95 4e-20
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 95 4e-20
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 95 4e-20
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 95 4e-20
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 94 6e-20
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 94 6e-20
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 91 7e-19
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 90 1e-18
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 90 1e-18
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 68 4e-12
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 68 4e-12
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF003137-9|AAB93646.3| 883|Caenorhabditis elegans Hypothetical ... 29 3.3
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 183 bits (445), Expect = 1e-46
Identities = 81/87 (93%), Positives = 86/87 (98%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEA+GGKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 INVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAELVD+VLDVVRKEAEGCDCL+ F
Sbjct: 107 TEGAELVDNVLDVVRKEAEGCDCLQGF 133
Score = 88.2 bits (209), Expect = 4e-18
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH+QAGQCGNQIGAKFWEVISDEHGI G Y G+SDLQLE
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLE 45
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 178 bits (434), Expect = 2e-45
Identities = 79/87 (90%), Positives = 84/87 (96%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEASGGKYVPRA +VDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 INVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAELVD+VLDVVRKEAE CDCL+ F
Sbjct: 107 TEGAELVDNVLDVVRKEAESCDCLQGF 133
Score = 97.1 bits (231), Expect = 8e-21
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVHIQAGQCGNQIGAKFWEVISDEHGID TGAY+GDSDLQLE
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLE 45
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 178 bits (433), Expect = 3e-45
Identities = 78/87 (89%), Positives = 85/87 (97%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
I+VYYNEA+ GKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 IDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAELVD+VLDV+RKEAEGCDCL+ F
Sbjct: 107 TEGAELVDNVLDVIRKEAEGCDCLQGF 133
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G+SDLQLE
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLE 45
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 178 bits (433), Expect = 3e-45
Identities = 78/87 (89%), Positives = 85/87 (97%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
I+VYYNEA+ GKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 IDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAELVD+VLDV+RKEAEGCDCL+ F
Sbjct: 107 TEGAELVDNVLDVIRKEAEGCDCLQGF 133
Score = 84.2 bits (199), Expect = 6e-17
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G++DLQLE
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLE 45
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 170 bits (413), Expect = 7e-43
Identities = 76/87 (87%), Positives = 81/87 (93%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEA KYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHY
Sbjct: 47 INVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAELVD+VLDVVRKEAE DCL+ F
Sbjct: 107 TEGAELVDNVLDVVRKEAESTDCLQGF 133
Score = 91.1 bits (216), Expect = 5e-19
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLE
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLE 45
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 170 bits (413), Expect = 7e-43
Identities = 76/87 (87%), Positives = 81/87 (93%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEA KYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHY
Sbjct: 47 INVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
TEGAELVD+VLDVVRKEAE DCL+ F
Sbjct: 107 TEGAELVDNVLDVVRKEAESTDCLQGF 133
Score = 91.1 bits (216), Expect = 5e-19
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLE
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLE 45
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 112 bits (269), Expect = 2e-25
Identities = 48/87 (55%), Positives = 66/87 (75%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
I YY E G KYVPRA++VDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y
Sbjct: 47 ITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
+GAE+VD VL V+R+EAE D L F
Sbjct: 107 EQGAEIVDKVLSVIRREAEAADSLEGF 133
Score = 76.2 bits (179), Expect = 2e-14
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLEASMSTITKLQG 287
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLE S +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 112 bits (269), Expect = 2e-25
Identities = 48/87 (55%), Positives = 66/87 (75%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
I YY E G KYVPRA++VDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y
Sbjct: 47 ITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYY 106
Query: 437 TEGAELVDSVLDVVRKEAEGCDCLRVF 517
+GAE+VD VL V+R+EAE D L F
Sbjct: 107 EQGAEIVDKVLSVIRREAEAADSLEGF 133
Score = 76.2 bits (179), Expect = 2e-14
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLEASMSTITKLQG 287
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLE S +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 104 bits (249), Expect = 6e-23
Identities = 42/88 (47%), Positives = 63/88 (71%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S+ +++E+ GK+VPRA+ VDLEP +D +R+G +G +F PD + G+ A NN+A+GH
Sbjct: 51 SLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGH 110
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G EL+D VLD +RK+ E C+ L+ F
Sbjct: 111 YTIGKELIDVVLDRIRKQTENCEGLQGF 138
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 221
RE V I GQ G QIG WE+ EHG+D G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAG 38
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 98.3 bits (234), Expect = 4e-21
Identities = 41/88 (46%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRA+ VDLEP +D VR+G + ++F P+ + G+ A NN+A+GH
Sbjct: 48 SYNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G EL+D V+D VR+ E C L+ F
Sbjct: 108 YTIGKELIDVVMDRVRRLTERCQSLQGF 135
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIV I GQ G QIG WE+ EHGI G D+ +E
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVE 45
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 96.3 bits (229), Expect = 1e-20
Identities = 37/88 (42%), Positives = 61/88 (69%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S ++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GH
Sbjct: 46 SFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGH 105
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G EL+D+VLD +R+ A+ C L+ F
Sbjct: 106 YTVGKELIDTVLDRIRRLADNCSGLQGF 133
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 221
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 96.3 bits (229), Expect = 1e-20
Identities = 37/88 (42%), Positives = 61/88 (69%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S ++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GH
Sbjct: 46 SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGH 105
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G EL+D+VLD +R+ A+ C L+ F
Sbjct: 106 YTVGKELIDTVLDRIRRLADNCSGLQGF 133
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLEA 257
MRE++ I GQ G QIG WE+ EHGI G D E+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGES 46
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 96.3 bits (229), Expect = 1e-20
Identities = 37/88 (42%), Positives = 61/88 (69%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S ++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GH
Sbjct: 46 SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGH 105
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G EL+D+VLD +R+ A+ C L+ F
Sbjct: 106 YTVGKELIDTVLDRIRRLADNCSGLQGF 133
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLEA 257
MRE++ I GQ G QIG WE+ EHGI G D E+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGES 46
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 96.3 bits (229), Expect = 1e-20
Identities = 37/88 (42%), Positives = 61/88 (69%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S ++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GH
Sbjct: 46 SFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGH 105
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G EL+D+VLD +R+ A+ C L+ F
Sbjct: 106 YTVGKELIDTVLDRIRRLADNCSGLQGF 133
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 221
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 95.9 bits (228), Expect = 2e-20
Identities = 40/88 (45%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRA+MVDLEP +D +R+G + +F P+ + G+ A NN+A+GH
Sbjct: 53 SFNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGH 112
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E++D V+D VR+ E C L+ F
Sbjct: 113 YTIGKEIIDVVMDRVRRLVENCRGLQGF 140
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
RE++ I GQ G Q+G WE+ EHGI G + + L ++
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVD 50
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 94.7 bits (225), Expect = 4e-20
Identities = 38/88 (43%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S + +++E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GH
Sbjct: 48 SFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E++D LD +R+ A+ C L+ F
Sbjct: 108 YTIGKEIIDLTLDRIRRLADNCTGLQGF 135
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 94.7 bits (225), Expect = 4e-20
Identities = 38/88 (43%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S + +++E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GH
Sbjct: 47 SFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGH 106
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E++D LD +R+ A+ C L+ F
Sbjct: 107 YTIGKEIIDLTLDRIRRLADNCTGLQGF 134
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 41
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 94.7 bits (225), Expect = 4e-20
Identities = 38/88 (43%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S + +++E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GH
Sbjct: 48 SFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E++D LD +R+ A+ C L+ F
Sbjct: 108 YTIGKEIIDLTLDRIRRLADNCTGLQGF 135
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 94.7 bits (225), Expect = 4e-20
Identities = 38/88 (43%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S + +++E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GH
Sbjct: 48 SFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E++D LD +R+ A+ C L+ F
Sbjct: 108 YTIGKEIIDLTLDRIRRLADNCTGLQGF 135
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 94.3 bits (224), Expect = 6e-20
Identities = 36/88 (40%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S ++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GH
Sbjct: 46 SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGH 105
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G EL+D+ LD +R+ A+ C L+ F
Sbjct: 106 YTVGKELIDTTLDRIRRLADNCSGLQGF 133
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 221
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 94.3 bits (224), Expect = 6e-20
Identities = 36/88 (40%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S ++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GH
Sbjct: 46 SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGH 105
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G EL+D+ LD +R+ A+ C L+ F
Sbjct: 106 YTVGKELIDTTLDRIRRLADNCSGLQGF 133
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 221
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 90.6 bits (215), Expect = 7e-19
Identities = 34/88 (38%), Positives = 61/88 (69%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S+ ++++ G++VPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GH
Sbjct: 45 SLGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGH 104
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E++D+ LD +R+ A C+ L+ F
Sbjct: 105 YTVGKEIIDTTLDRIRRLANNCEGLQGF 132
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGI 209
MRE++ I GQ G QIG WE+ EHGI
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGI 30
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 89.8 bits (213), Expect = 1e-18
Identities = 38/88 (43%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
+IN ++ E +GGK+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G
Sbjct: 54 TINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGR 113
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E++D V+D V++ AE C+ L+ F
Sbjct: 114 YTIGREMIDVVMDRVKRLAENCNGLQGF 141
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 236
RE++ I GQ G QIG WE+ EHGI G + D
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVED 45
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 89.8 bits (213), Expect = 1e-18
Identities = 38/88 (43%), Positives = 60/88 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
+IN ++ E +GGK+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G
Sbjct: 26 TINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGR 85
Query: 434 YTEGAELVDSVLDVVRKEAEGCDCLRVF 517
YT G E++D V+D V++ AE C+ L+ F
Sbjct: 86 YTIGREMIDVVMDRVKRLAENCNGLQGF 113
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Frame = +2
Query: 260 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKG 430
++ + +A YVPRAV+VDLEP ++ + P F +F DN GAGNNWA G
Sbjct: 50 DLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG 109
Query: 431 HYTEGAELVDSVLDVVRKEAEGCDCL 508
Y +G E+ + ++D++ +EAE + L
Sbjct: 110 -YCQGQEVQEKIMDIIIREAENTNNL 134
Score = 42.7 bits (96), Expect = 2e-04
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 129 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Frame = +2
Query: 260 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKG 430
++ + +A YVPRAV+VDLEP ++ + P F +F DN GAGNNWA G
Sbjct: 50 DLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG 109
Query: 431 HYTEGAELVDSVLDVVRKEAEGCDCL 508
Y +G E+ + ++D++ +EAE + L
Sbjct: 110 -YCQGQEVQEKIMDIIIREAENTNNL 134
Score = 42.7 bits (96), Expect = 2e-04
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 129 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -3
Query: 464 PNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSP 336
P+Q P SPS SP Q RRR P G +++ R RSP
Sbjct: 443 PSQSKSPAPRRRRSPSKSP-QAPRRRRSPSGSKSRSPRRRRSP 484
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical
protein T21C9.2 protein.
Length = 1058
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 422 AKGHYTEGAELVDSVLDVVRKEAEGCDCLR 511
++G Y + E +++ LDV+ KE G C R
Sbjct: 407 SQGDYPKAIECIETSLDVLSKELNGVTCFR 436
>AF003137-9|AAB93646.3| 883|Caenorhabditis elegans Hypothetical
protein C27A12.9 protein.
Length = 883
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 165 IGAKFWEVISDEHGIDATGAYSGDSDLQLEASMSTITK 278
IG + SD+HG+ +TG + G+S+ ++ A + +K
Sbjct: 245 IGQTIETMKSDDHGMTSTGDHGGESENEIRAGILVHSK 282
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +1
Query: 76 YLIFDSGGSKFLVQS*GKSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSL 252
Y I D SK+++Q ++ + +R + S +TP VL A T C++
Sbjct: 64 YRILDQNESKYILQQQSAAAIEEKKGTLLRRKSSKKLIEPLPMIITPPVLMARTQCCAV 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,365,549
Number of Sequences: 27780
Number of extensions: 317915
Number of successful extensions: 1070
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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