Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0248
         (268 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061618-1|AAL29166.1|  775|Drosophila melanogaster SD08238p pro...    27   3.6  
AE014298-1265|AAF46439.1|  775|Drosophila melanogaster CG32707-P...    27   3.6  
BT023881-1|ABA81815.1|   99|Drosophila melanogaster RE64541p pro...    26   8.3  

>AY061618-1|AAL29166.1|  775|Drosophila melanogaster SD08238p
           protein.
          Length = 775

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 267 HLFFITQNITIALNTDGCHRRHPRRYVSEFNIS 169
           H FFI  ++T ALN    HR  P   +SE  +S
Sbjct: 661 HSFFIQFSLTAALNYSTQHRMGPLVKLSEATVS 693


>AE014298-1265|AAF46439.1|  775|Drosophila melanogaster CG32707-PA
           protein.
          Length = 775

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 267 HLFFITQNITIALNTDGCHRRHPRRYVSEFNIS 169
           H FFI  ++T ALN    HR  P   +SE  +S
Sbjct: 661 HSFFIQFSLTAALNYSTQHRMGPLVKLSEATVS 693


>BT023881-1|ABA81815.1|   99|Drosophila melanogaster RE64541p
           protein.
          Length = 99

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -2

Query: 246 NITIALNTDGCHRRHPRRYVSEFNISSCSTCKW*CTESRGRSMGRSKNRRV 94
           NIT+A ++   +        SEFN  S +T +     S  RS GRS   R+
Sbjct: 2   NITMASDSGSDYEVELSSIPSEFNAQSTTTVRIYWETSMTRSEGRSSRARM 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,637,517
Number of Sequences: 53049
Number of extensions: 83011
Number of successful extensions: 143
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 24,988,368
effective HSP length: 67
effective length of database: 21,434,085
effective search space used: 450115785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)