Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0246
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   4.1  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   9.4  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    21   9.4  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    21   9.4  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    21   9.4  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    21   9.4  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    21   9.4  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    21   9.4  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    21   9.4  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   9.4  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    21   9.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   9.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   9.4  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 325 YHHHGHAEFGQQHVRY 278
           +HHH H     QH+ Y
Sbjct: 351 HHHHHHQTQSLQHLHY 366



 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 331 YGYHHHGHAEFGQ 293
           YG H  GHA+ G+
Sbjct: 210 YGRHLPGHAQMGR 222


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 337 GQGAFGNMCRGGRMFAP 387
           G G FG++CRG     P
Sbjct: 640 GGGEFGDVCRGKLKLPP 656


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/16 (37%), Positives = 7/16 (43%)
 Frame = +3

Query: 276 GYRTCCCPNSACPWWW 323
           G+    C N    WWW
Sbjct: 353 GFLQPVCQNEMNKWWW 368


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 355 NMCRGGRMFAPTKPWRALA 411
           N+C  GR+F    P  AL+
Sbjct: 192 NLCMAGRLFGYLCPGMALS 210


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 368 RHIGPLTPFPPRFIPPDMYR 387


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 353 RHIGPLTPFPPRFIPPDMYR 372


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 365 RHMLPKAP*PDLWVPPPRTR 306
           RH+ P  P P  ++PP   R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 224 QPYCVSKEAGPKPVPNHGVPDV 289
           QP  V+++      P HG P V
Sbjct: 259 QPVTVNRQLNSDVQPGHGSPPV 280


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,464
Number of Sequences: 438
Number of extensions: 3088
Number of successful extensions: 22
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)