Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0245
         (568 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53148-7|AAB37074.4|  529|Caenorhabditis elegans Cytochrome p450...    29   2.3  
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z74043-12|CAA98548.1|  503|Caenorhabditis elegans Hypothetical p...    27   7.1  
Z74040-7|CAA98515.1|  503|Caenorhabditis elegans Hypothetical pr...    27   7.1  
U23454-8|ABS19473.1|  153|Caenorhabditis elegans Hypothetical pr...    27   7.1  
AC006677-3|AAF39952.2|  298|Caenorhabditis elegans Serpentine re...    27   7.1  

>U53148-7|AAB37074.4|  529|Caenorhabditis elegans Cytochrome p450
           family protein 32A1 protein.
          Length = 529

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +2

Query: 50  DVDDLMRRYTXDVIASAGFGLQVNSLVDKDNEFYECGQAMFSTSW 184
           D     +R T D+I     G+QVN+ +  +NE+    + +    W
Sbjct: 191 DAFPYFKRCTLDIICETAMGIQVNAQLGHNNEYVHAVKRISEIVW 235


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 93  PQPVSDSRLIRWSTRITNSTSVVK 164
           PQP+    L+ W  R+TN  S VK
Sbjct: 329 PQPIDGETLLSWCQRVTNGYSHVK 352


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 93  PQPVSDSRLIRWSTRITNSTSVVK 164
           PQP+    L+ W  R+TN  S VK
Sbjct: 329 PQPIDGETLLSWCQRVTNGYSHVK 352


>Z74043-12|CAA98548.1|  503|Caenorhabditis elegans Hypothetical
           protein T19B10.1 protein.
          Length = 503

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 8/38 (21%), Positives = 24/38 (63%)
 Frame = +2

Query: 41  EDVDVDDLMRRYTXDVIASAGFGLQVNSLVDKDNEFYE 154
           E VD+   ++R   D+I+    G+++++ ++ D+++ +
Sbjct: 174 ETVDIFPYVKRCALDIISETAMGIKIDAQINHDHKYVQ 211


>Z74040-7|CAA98515.1|  503|Caenorhabditis elegans Hypothetical
           protein T19B10.1 protein.
          Length = 503

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 8/38 (21%), Positives = 24/38 (63%)
 Frame = +2

Query: 41  EDVDVDDLMRRYTXDVIASAGFGLQVNSLVDKDNEFYE 154
           E VD+   ++R   D+I+    G+++++ ++ D+++ +
Sbjct: 174 ETVDIFPYVKRCALDIISETAMGIKIDAQINHDHKYVQ 211


>U23454-8|ABS19473.1|  153|Caenorhabditis elegans Hypothetical
           protein C10A4.9 protein.
          Length = 153

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 311 LXSIVLVTISLKKRVTXCGILLFLFSWLTLETVQPISF 198
           + S+ L T  ++K++    I+L LFSWL L  +   SF
Sbjct: 86  ILSLALFTRVIRKKIAV--IILILFSWLVLSILLASSF 121


>AC006677-3|AAF39952.2|  298|Caenorhabditis elegans Serpentine
           receptor, class x protein28 protein.
          Length = 298

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = -2

Query: 459 YIPLWF*HLFCHSKTYIFFV*FV 391
           ++PLW+ H+F +SKT +F+  F+
Sbjct: 106 FMPLWYTHIFSNSKT-VFYRNFI 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,769,115
Number of Sequences: 27780
Number of extensions: 189085
Number of successful extensions: 481
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)