Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0245
         (568 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    45   6e-07
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    23   1.6  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    23   1.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.5  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   8.6  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    21   8.6  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 44.8 bits (101), Expect = 6e-07
 Identities = 20/68 (29%), Positives = 39/68 (57%)
 Frame = +2

Query: 41  EDVDVDDLMRRYTXDVIASAGFGLQVNSLVDKDNEFYECGQAMFSTSWPQRFKMILAAQF 220
           E ++  +L  R+T DVI S  FG+ ++S+ ++++EF   G+ +F+ ++    +M L    
Sbjct: 170 EPIECRELTARFTTDVIGSCAFGIDMSSMTNENSEFRRMGREVFAVNFMNVMRMKLKQFM 229

Query: 221 PTLAKKIG 244
           P L   +G
Sbjct: 230 PRLYDLLG 237



 Score = 37.9 bits (84), Expect = 7e-05
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 274 FFREIVTSTMXYRLKNNVXXPDMIQLLMDAYKGTLK 381
           FF  +VT T+ YR  NN+  PD I +LM+  K   K
Sbjct: 248 FFTRVVTDTIKYRNDNNIVRPDFINMLMELQKNPQK 283


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 337 DMIQLLMDAYKGTLKNXSNESDEKNVGFAMTE 432
           D IQL+       ++N   E+DE N+G   T+
Sbjct: 103 DDIQLVKGIANECIENAKGETDECNIGNKYTD 134


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 337 DMIQLLMDAYKGTLKNXSNESDEKNVGFAMTE 432
           D IQL+       ++N   E+DE N+G   T+
Sbjct: 103 DDIQLVKGIANECIENAKGETDECNIGNKYTD 134


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -2

Query: 273 TSYXLWNTFIPIFLANVGNCAANI 202
           T+  +W  F+P++     N A  I
Sbjct: 856 TTCVIWLAFVPLYFGTGNNVALRI 879


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 267 YXLWNTFIPIFL 232
           Y +W  F+P+FL
Sbjct: 220 YGIWVYFVPLFL 231


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 267 YXLWNTFIPIFL 232
           Y +W  F+P+FL
Sbjct: 96  YGIWVYFVPLFL 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,516
Number of Sequences: 438
Number of extensions: 2316
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)