Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0244
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38603| Best HMM Match : TPR_1 (HMM E-Value=2e-20) 33 0.20
SB_54462| Best HMM Match : TPR_1 (HMM E-Value=3.9e-32) 30 1.4
SB_44702| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.03) 29 1.9
SB_23418| Best HMM Match : NAD_binding_1 (HMM E-Value=1.2e-16) 29 2.5
SB_1148| Best HMM Match : TPR_1 (HMM E-Value=0) 29 3.3
SB_28422| Best HMM Match : TerC (HMM E-Value=4) 28 4.4
SB_52151| Best HMM Match : TPR_1 (HMM E-Value=0) 28 5.8
SB_48977| Best HMM Match : TPR_1 (HMM E-Value=0) 28 5.8
SB_232| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_18415| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_42486| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 7.6
SB_23137| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 7.6
SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08) 27 7.6
>SB_38603| Best HMM Match : TPR_1 (HMM E-Value=2e-20)
Length = 313
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 73 SSTIMNSSHNKHSIPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYL 231
S + +S K+ + + L D +RF +L +ED + V IC +E H F L
Sbjct: 223 SRALKDSLQKKYGLESNALSDEDTRFTSSLISEDNTSFVVICLSLEWLHLFTL 275
>SB_54462| Best HMM Match : TPR_1 (HMM E-Value=3.9e-32)
Length = 425
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 73 SSTIMNSSHNKHSIPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYL 231
S + +S K+ + + D +RF +L +ED + V IC +E H F L
Sbjct: 300 SRALKDSLQKKYGLESNAPSDEDTRFTSSLISEDNTSFVVICLSLEWLHLFTL 352
>SB_44702| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.03)
Length = 307
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 442 HIGQKPPGVSLKGRSMKMRSPGMC 513
H KPP S+KG +K+ +PG C
Sbjct: 14 HFEVKPPKPSVKGHPVKLLTPGQC 37
>SB_23418| Best HMM Match : NAD_binding_1 (HMM E-Value=1.2e-16)
Length = 594
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 183 VSSIFCW*IYYETTTKVI*YIYWNRVFVMT*IHN--SRTHICISSFAVYYILSLL 25
+S++F + Y T+T VI WNR + H S +H IS FA++ LL
Sbjct: 503 ISTMFSIPVLYFTSTSVI----WNRQYCFMDFHQHESLSHYIISLFAIFIATPLL 553
>SB_1148| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 860
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 73 SSTIMNSSHNKHSIPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYL 231
S + +S K+ + + D +R+ +L +ED + V IC +E H F L
Sbjct: 714 SRALKDSLQKKYGLESNAPSDEDTRYTSSLISEDNTSFVVICLSLEWLHLFTL 766
>SB_28422| Best HMM Match : TerC (HMM E-Value=4)
Length = 465
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 97 HNKHSIPIDILDDLCSRFIINLPAEDRGNLVRICFQIELA-HWF 225
H KHS P I C R ++N ++R + + + LA HW+
Sbjct: 323 HRKHSHPHPIWVTWCHRMVVNPKPKERCVNDTVLYYVNLAQHWW 366
>SB_52151| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1137
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 73 SSTIMNSSHNKHSIPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYL 231
S + +S K+ + + D +R+ +L +ED + V IC +E H F L
Sbjct: 620 SRALKDSLQKKYGLESNTPSDEDTRYRSSLISEDNRSFVVICLSLEWLHLFTL 672
>SB_48977| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 725
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 73 SSTIMNSSHNKHSIPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYL 231
S + +S K+ + + D +R+ +L +ED + V IC +E H F L
Sbjct: 409 SRALKDSLQKKYGLESNAPSDEDTRYRSSLISEDNTSFVVICLSLEWLHLFTL 461
>SB_232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 713
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 73 SSTIMNSSHNKHSIPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYL 231
S + +S K+ + + D +R+ +L +ED + V IC I+ H F L
Sbjct: 346 SRALKDSLQKKYGLESNAPSDEDTRYTSSLISEDNTSFVVICLSIKWLHLFTL 398
>SB_18415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 623
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 133 DLCSRFIINLPAEDRGNLVRICFQIELAHWFYLDYY 240
DLC + +L D L I + + HWF++DY+
Sbjct: 60 DLCVKCTKSLRLHDWLYLGFIILTVIVLHWFFIDYF 95
>SB_42486| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1554
Score = 27.5 bits (58), Expect = 7.6
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = -2
Query: 400 IAPYVGTVCLYSLQLSKTASRLLTCSRSCGTCWK-----ICAANSLIPQGYTFLIRQCSN 236
+ P V LY++QLS+ S TCS + T K + S +P T LI+ S
Sbjct: 127 VIPDVTVDPLYAVQLSQGDSFNFTCSSATHTTLKWTKRPKTGSESDVPSSQTVLIKDTSK 186
Query: 235 NPNKTNEPIRSGSIS 191
N + IR+ S
Sbjct: 187 NQQRLILMIRNAQPS 201
>SB_23137| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1022
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 199 FQIELAHWFYLDYYCTDESRKYTPVVLESLQHIFSNMSRNSE 324
F + HW + T E+ K TPV LE+ ++ + E
Sbjct: 75 FNVSYCHWSFPRCDYTTETIKSTPVCLETCEYFMKKCDKEFE 116
>SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08)
Length = 542
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 355 ITGENINRLYLHTELYCSMMTSLMCFLYNHIGQKPPGVSLKGRSMKMRSPG 507
I G + ++H S++ + CF +N +G P +LKG+ +++S G
Sbjct: 223 IGGGGLGLAFVHLLSVLSLI--IFCFCFNTVGGLSPIDALKGKESEVQSGG 271
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,403,287
Number of Sequences: 59808
Number of extensions: 342601
Number of successful extensions: 735
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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