Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0244
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          27   0.54 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   1.2  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   2.9  

>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 26.6 bits (56), Expect = 0.54
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 364 LQLSKTASRLLTCSRSCGTCWKICAANSL 278
           +Q+  T ++   C ++CGT WK  + +SL
Sbjct: 195 IQIKHTKTKNGCCRKTCGTGWKYRSISSL 223


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 385  LHTELYCSMMTSLMCFLYNHIGQKPPGVSLKGRSMKMRSP 504
            LH     +++T++   + N  G  P GVS  G ++  +SP
Sbjct: 2671 LHWREMKALLTNVQNLIVNEPGNFPEGVSGAGAALMSKSP 2710


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 206 SNWLIGFIWIITALTNQESIPLWY*RVCST-YFPT 307
           S  LIG +WII  +T   ++P+    + ST YFPT
Sbjct: 252 SKCLIGIVWIIALIT---AVPI---AIFSTLYFPT 280


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,757
Number of Sequences: 2352
Number of extensions: 11641
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)