Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0241
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g22820.1 68418.m02668 expressed protein 29 2.2
At2g25730.1 68415.m03084 expressed protein 29 2.2
At5g15900.1 68418.m01860 expressed protein several hypothetical ... 28 5.2
At2g21380.1 68415.m02544 kinesin motor protein-related 28 5.2
At2g15680.1 68415.m01795 calmodulin-related protein, putative si... 28 6.8
At2g14530.1 68415.m01626 expressed protein 28 6.8
At5g15890.1 68418.m01859 expressed protein 27 9.0
At4g33150.2 68417.m04723 lysine-ketoglutarate reductase/saccharo... 27 9.0
At4g33150.1 68417.m04722 lysine-ketoglutarate reductase/saccharo... 27 9.0
At2g17540.2 68415.m02030 expressed protein 27 9.0
At2g17540.1 68415.m02029 expressed protein 27 9.0
At1g61850.1 68414.m06979 patatin family protein similar to membr... 27 9.0
At1g52630.2 68414.m05942 expressed protein contains Pfam PF03138... 27 9.0
At1g52630.1 68414.m05943 expressed protein contains Pfam PF03138... 27 9.0
>At5g22820.1 68418.m02668 expressed protein
Length = 490
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 190 LSNLDIATWAAAAVNGDTLKHLCWISEST 104
LS +WA + D L+H+ WI+E+T
Sbjct: 232 LSGAGCTSWAHCLESDDILRHILWIAENT 260
>At2g25730.1 68415.m03084 expressed protein
Length = 2464
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 327 QVISACVPTVWPCKTPLHKWQCYNLSLPAFP 419
+VISACVP V+P ++ H W C + +P P
Sbjct: 1081 EVISACVPPVYPPRSG-HGWACIPV-IPTTP 1109
>At5g15900.1 68418.m01860 expressed protein several hypothetical
proteins - Arabidopsis thaliana
Length = 426
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 622 FPGLLMIRHRLPTHLNGG-WALGGNC 696
F G++ +R P+H GG W GG+C
Sbjct: 289 FKGVMYLRSFAPSHFEGGLWNEGGDC 314
>At2g21380.1 68415.m02544 kinesin motor protein-related
Length = 1058
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 178 DIATWAAAAVNGDTLKHLCWIS-ESTTLVLLPWPCKTLIQC 59
++ + AAAA N D H+C + ES T +L PC+ C
Sbjct: 993 EMKSQAAAAANADANSHICKVCFESPTATIL-LPCRHFCLC 1032
>At2g15680.1 68415.m01795 calmodulin-related protein, putative
similar to calmodulin-related protein 2, touch-induced
SP:P25070 from [Arabidopsis thaliana]
Length = 187
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = -1
Query: 467 GLRSSD-HNEWWTVQLHGEGR 408
G+RSSD N +WT L+G+G+
Sbjct: 116 GIRSSDIRNSFWTFDLNGDGK 136
>At2g14530.1 68415.m01626 expressed protein
Length = 412
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 610 ETMRFPGLLMIRHRLPTHLNGG-WALGGNC 696
+T R G++ R + P H GG W GG C
Sbjct: 286 KTKRPGGIIFFRTQSPRHFEGGDWDQGGTC 315
>At5g15890.1 68418.m01859 expressed protein
Length = 526
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +1
Query: 622 FPGLLMIRHRLPTHLNGG-WALGGNC 696
F GL +R P H GG W GG+C
Sbjct: 401 FKGLAFLRSFSPQHFEGGAWNEGGDC 426
>At4g33150.2 68417.m04723 lysine-ketoglutarate
reductase/saccharopine dehydrogenase bifunctional enzyme
identical to lysine-ketoglutarate reductase/saccharopine
dehydrogenase GI:2052508 from [Arabidopsis thaliana]
Length = 1064
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 42 SPATMAHCMRVLHGQGSRTRV 104
+P T +HC R+LHG RT +
Sbjct: 31 TPLTPSHCARLLHGGKDRTGI 51
>At4g33150.1 68417.m04722 lysine-ketoglutarate
reductase/saccharopine dehydrogenase bifunctional enzyme
identical to lysine-ketoglutarate reductase/saccharopine
dehydrogenase GI:2052508 from [Arabidopsis thaliana]
Length = 1064
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 42 SPATMAHCMRVLHGQGSRTRV 104
+P T +HC R+LHG RT +
Sbjct: 31 TPLTPSHCARLLHGGKDRTGI 51
>At2g17540.2 68415.m02030 expressed protein
Length = 275
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 404 SSGLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLT 511
S+G AV T H DHL+ Q ++LA+A T
Sbjct: 49 SNGSSASAVVHTHHLDHLLNDQTRSPEELAQASKAT 84
>At2g17540.1 68415.m02029 expressed protein
Length = 275
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 404 SSGLPRVAVPSTIHCDHLIEAQVGGEKDLARAKDLT 511
S+G AV T H DHL+ Q ++LA+A T
Sbjct: 49 SNGSSASAVVHTHHLDHLLNDQTRSPEELAQASKAT 84
>At1g61850.1 68414.m06979 patatin family protein similar to
membrane-associated calcium-independent phospholipase A2
gamma; IPLA2 gamma [Homo sapiens] GI:8453174; contains
Patatin domain PF01734, PF00514:
Armadillo/beta-catenin-like repeat
Length = 1265
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -3
Query: 192 PCRTWTSPPGPRRRSMEIR*NIFVGFQRVPPLSCYPGH-AKLSYSAPWSP 46
P T + PP P + E+ F VPPLS GH K S P SP
Sbjct: 915 PLITGSLPPSPLLFTPELGPQKFNRIDMVPPLSLDGGHVGKTVMSPPSSP 964
>At1g52630.2 68414.m05942 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown;
Length = 351
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 123 QRCFSVSPLTAAAAQVAMSKFDKVPLPYEKLTKNLE 230
Q C+S LT++ + A+ FD +P P+ L E
Sbjct: 119 QACYSAIHLTSSLEKKAVELFDAIPKPFLSLHLRFE 154
>At1g52630.1 68414.m05943 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown;
Length = 439
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 123 QRCFSVSPLTAAAAQVAMSKFDKVPLPYEKLTKNLE 230
Q C+S LT++ + A+ FD +P P+ L E
Sbjct: 207 QACYSAIHLTSSLEKKAVELFDAIPKPFLSLHLRFE 242
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,537,315
Number of Sequences: 28952
Number of extensions: 360978
Number of successful extensions: 795
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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