Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0236
(548 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-2559|AAF57791.1| 649|Drosophila melanogaster CG18635-P... 29 3.1
DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.6
DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.6
DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.6
DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.6
DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.6
DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.6
DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.6
BT016095-1|AAV36980.1| 407|Drosophila melanogaster LD35426p pro... 28 9.6
BT001323-1|AAN71078.1| 495|Drosophila melanogaster AT16616p pro... 28 9.6
AY058702-1|AAL13931.1| 407|Drosophila melanogaster LD42420p pro... 28 9.6
AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA... 28 9.6
AE014296-123|AAN11448.1| 581|Drosophila melanogaster CG17129-PC... 28 9.6
AE014296-122|AAN11447.1| 581|Drosophila melanogaster CG17129-PB... 28 9.6
AE014296-121|AAF47402.2| 581|Drosophila melanogaster CG17129-PA... 28 9.6
>AE013599-2559|AAF57791.1| 649|Drosophila melanogaster CG18635-PA
protein.
Length = 649
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 305 IEPHIHWKPQLIDGILKYGD-RVHTMSLPRASAPPGLRPNEIID 433
I+ ++ P+L+ G LK D HT+ +P++ P L P +++D
Sbjct: 418 IKENVPHPPKLLIGRLKDEDPEEHTVLIPQSPKPSPLTPKDVVD 461
>DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 188 PRPSFGXR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 403 PKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 188 PRPSFGXR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 403 PKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 188 PRPSFGXR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 403 PKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 188 PRPSFGXR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 403 PKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 188 PRPSFGXR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 403 PKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 188 PRPSFGXR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 403 PKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 188 PRPSFGXR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 403 PKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>BT016095-1|AAV36980.1| 407|Drosophila melanogaster LD35426p
protein.
Length = 407
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 381 LCPELLLRQDYAPTRLSTSSTSPNF 455
L P+ DY PT ++TS+ SPNF
Sbjct: 180 LQPKTTDMDDYNPTSVTTSTNSPNF 204
>BT001323-1|AAN71078.1| 495|Drosophila melanogaster AT16616p
protein.
Length = 495
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 381 LCPELLLRQDYAPTRLSTSSTSPNF 455
L P+ DY PT ++TS+ SPNF
Sbjct: 284 LQPKTTDMDDYNPTSVTTSTNSPNF 308
>AY058702-1|AAL13931.1| 407|Drosophila melanogaster LD42420p
protein.
Length = 407
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 381 LCPELLLRQDYAPTRLSTSSTSPNF 455
L P+ DY PT ++TS+ SPNF
Sbjct: 180 LQPKTTDMDDYNPTSVTTSTNSPNF 204
>AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA
protein.
Length = 2249
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 188 PRPSFGXR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 460 PKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 500
>AE014296-123|AAN11448.1| 581|Drosophila melanogaster CG17129-PC,
isoform C protein.
Length = 581
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 381 LCPELLLRQDYAPTRLSTSSTSPNF 455
L P+ DY PT ++TS+ SPNF
Sbjct: 354 LQPKTTDMDDYNPTSVTTSTNSPNF 378
>AE014296-122|AAN11447.1| 581|Drosophila melanogaster CG17129-PB,
isoform B protein.
Length = 581
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 381 LCPELLLRQDYAPTRLSTSSTSPNF 455
L P+ DY PT ++TS+ SPNF
Sbjct: 354 LQPKTTDMDDYNPTSVTTSTNSPNF 378
>AE014296-121|AAF47402.2| 581|Drosophila melanogaster CG17129-PA,
isoform A protein.
Length = 581
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 381 LCPELLLRQDYAPTRLSTSSTSPNF 455
L P+ DY PT ++TS+ SPNF
Sbjct: 354 LQPKTTDMDDYNPTSVTTSTNSPNF 378
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,769,010
Number of Sequences: 53049
Number of extensions: 312012
Number of successful extensions: 943
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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