Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0232
(399 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 2e-35
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 2e-35
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 144 2e-35
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 144 2e-35
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 128 1e-30
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 101 3e-22
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 81 2e-16
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 55 2e-08
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 5e-07
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 44 6e-05
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 42 2e-04
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 40 0.001
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.016
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.028
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.065
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.086
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 31 0.26
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.35
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 31 0.35
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 29 1.8
SB_49939| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 28 2.4
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 27 5.6
SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026) 27 5.6
SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_45790| Best HMM Match : SERTA (HMM E-Value=2.8e-07) 27 7.4
SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5) 27 7.4
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 27 7.4
SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19) 26 9.8
SB_16975| Best HMM Match : MFS_1 (HMM E-Value=2.6e-24) 26 9.8
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 26 9.8
SB_1963| Best HMM Match : rve (HMM E-Value=0.022) 26 9.8
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 144 bits (350), Expect = 2e-35
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 144 bits (350), Expect = 2e-35
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 144 bits (350), Expect = 2e-35
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 144 bits (350), Expect = 2e-35
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
Score = 144 bits (350), Expect = 2e-35
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 289 IQKESTLHLVLRL 301
Score = 144 bits (350), Expect = 2e-35
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 365 IQKESTLHLVLRL 377
Score = 144 bits (350), Expect = 2e-35
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 441 IQKESTLHLVLRL 453
Score = 144 bits (350), Expect = 2e-35
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 517 IQKESTLHLVLRL 529
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 144 bits (350), Expect = 2e-35
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 144 bits (350), Expect = 2e-35
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 144 bits (350), Expect = 2e-35
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
Score = 144 bits (350), Expect = 2e-35
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 289 IQKESTLHLVLRL 301
Score = 144 bits (350), Expect = 2e-35
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 365 IQKESTLHLVLRL 377
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 144 bits (350), Expect = 2e-35
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 81.4 bits (192), Expect = 2e-16
Identities = 37/61 (60%), Positives = 50/61 (81%)
Frame = +2
Query: 68 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 247
KT TL+VEASDT+E+VK KIQ++EGIPP QRL++ ++L D R+L+DYNI++ S LHL
Sbjct: 86 KTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHLF 145
Query: 248 L 250
L
Sbjct: 146 L 146
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 128 bits (310), Expect = 1e-30
Identities = 62/66 (93%), Positives = 64/66 (96%)
Frame = +2
Query: 29 SNTMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 208
++TMQIFV TLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 76 TSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 135
Query: 209 DYNIQK 226
DYNIQK
Sbjct: 136 DYNIQK 141
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 101 bits (241), Expect = 3e-22
Identities = 42/48 (87%), Positives = 44/48 (91%)
Frame = +1
Query: 256 RGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNGL 399
RGG IEPSLRILA KYNC+KMICRKCYARLHPRATNCRK KCGH+N L
Sbjct: 24 RGGVIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHSNNL 71
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 81.4 bits (192), Expect = 2e-16
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 143 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 256
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 39
Score = 50.4 bits (115), Expect = 5e-07
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1
Query: 256 RGGTIEPSLRILAMKYNCEKMICR 327
RGG IEPSLRILA KYNC+KMICR
Sbjct: 40 RGGVIEPSLRILAQKYNCDKMICR 63
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 54.8 bits (126), Expect = 2e-08
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +2
Query: 44 IFVXTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 220
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 221 QKESTLHLVLRL 256
+TLHL++RL
Sbjct: 133 FAGATLHLIVRL 144
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 50.4 bits (115), Expect = 5e-07
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1
Query: 256 RGGTIEPSLRILAMKYNCEKMICR 327
RGG IEPSLRILA KYNC+KMICR
Sbjct: 24 RGGVIEPSLRILAQKYNCDKMICR 47
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 43.6 bits (98), Expect = 6e-05
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Frame = +2
Query: 29 SNTMQIFVXTLTGKTITLEVEASDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLEDGR 199
S M I TL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D
Sbjct: 64 SVNMIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDN 123
Query: 200 TLSDYNIQKESTLHLVLRLEEXQLNLPFAFSP*SITVRK*FAVNAMP 340
L +YNI ++S + +++ + P A +P +T A A P
Sbjct: 124 PLKEYNIDEKSFVVIMVAKPKP---APAAVAPAPVTTTIPQAATASP 167
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 41.5 bits (93), Expect = 2e-04
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 35 TMQIFVXTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 211
T Q+F T TL +D + +K++I+ K GIP D QRL F K+L D TL+
Sbjct: 5 TFQVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAK 64
Query: 212 YNIQK 226
N+++
Sbjct: 65 VNLKQ 69
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 214
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 215 NIQKESTLHLVLR 253
++++ + +V R
Sbjct: 61 SVKENDVILMVRR 73
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 35.5 bits (78), Expect = 0.016
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 134 KEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
+EGIP ++QRLIF GK L+D + L +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 34.7 bits (76), Expect = 0.028
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 62 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES-TL 238
+G L++ + TIE ++ ++ DK G PP QR I K + +L +++ T
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRETGFTA 103
Query: 239 HLVL 250
+L L
Sbjct: 104 YLYL 107
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 33.5 bits (73), Expect = 0.065
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKE 139
M +++ TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.086
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 140 GIPPDQQRLIFAGKQLEDGRTLSDYN 217
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.5 bits (68), Expect = 0.26
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +2
Query: 14 RVXYFSNTMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 193
R+ + TM + T G T+ +E+ ++E++KA+ + + GIP + RL LED
Sbjct: 177 RLKFARKTM--LLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLED 234
Query: 194 GRTLSDYNIQKEST 235
+ + +++T
Sbjct: 235 SEKICERGHLQKAT 248
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.1 bits (67), Expect = 0.35
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 101 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 244
T+ ++K + +K G+ RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 31.1 bits (67), Expect = 0.35
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 47 FVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 226
FV G+ ITL + ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 227 ESTLHLVLR 253
+TL + L+
Sbjct: 229 GATLQIELQ 237
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 65 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 193
G T E+E A +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 352 EDEDGHSIYGKSFSHSYTSWRECEGKV 272
++E I SFS T WR CEG++
Sbjct: 775 DEEMNQVIISSSFSAKLTKWRVCEGQI 801
>SB_49939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 162 VSSLPGNN*KMAALFQTITSRKNPHFTWF 248
+ ++ N K+AA+ I+S NP FTWF
Sbjct: 8 IGAIASNAEKVAAVAGAISSLDNPGFTWF 36
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +2
Query: 8 ILRVXYFSNTMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 187
I R+ + ++ L G +IT+ +E D +EN++ +K+ +PP ++L+F + L
Sbjct: 85 ISRIEGLDHCRRLSKLYLGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTL 142
Query: 188 E 190
+
Sbjct: 143 Q 143
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/62 (22%), Positives = 34/62 (54%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
+Q + T GKTI L E + ++ + ++K+G+ + ++L + ++L+ T ++
Sbjct: 714 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDTEEK 773
Query: 218 IQ 223
+Q
Sbjct: 774 LQ 775
>SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026)
Length = 309
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 50 VXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR---TLSDYNI 220
V + G+T + +I +K KI + +QRL++ +L++ + LS++ +
Sbjct: 60 VAMMGGETTVIPYNPVMSIAELKLKISQNIRVDRLKQRLMYNDTELKENKGSGKLSEFGV 119
Query: 221 QKESTLHLVLRLEE 262
+T+ L++ L E
Sbjct: 120 PPYATISLIVVLYE 133
>SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1230
Score = 26.6 bits (56), Expect = 7.4
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +1
Query: 34 HNANIRXNPYGEDHYI--GGGSFRHY 105
HNA I+ N G D+Y+ GGG + Y
Sbjct: 187 HNAPIKRNCSGNDYYVKAGGGVYFEY 212
>SB_45790| Best HMM Match : SERTA (HMM E-Value=2.8e-07)
Length = 1213
Score = 26.6 bits (56), Expect = 7.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 165 RRCWSGGIPSLSWILALTFSIVSEASTSNVMVFPV 61
++C S G+P + WI + T ++V + S N PV
Sbjct: 1093 QQCASYGLPLVQWITSKTLAVVDQ-SPDNASTDPV 1126
>SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5)
Length = 106
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/62 (22%), Positives = 33/62 (53%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
+Q + T GKTI L E + ++ + ++K+G+ + + L + ++L+ T ++
Sbjct: 10 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDTEEK 69
Query: 218 IQ 223
+Q
Sbjct: 70 LQ 71
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 26.6 bits (56), Expect = 7.4
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +2
Query: 65 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 244
G+ ++ + +D ENV I+ PD ++ I G L+DG+T+ D L L
Sbjct: 515 GRNLSRCILGNDETENV-GNIESS----PDSKKNILEGLDLQDGKTVEDLLSDYRRELEL 569
Query: 245 VLRLEE 262
++++
Sbjct: 570 YRQIKD 575
>SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19)
Length = 1341
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 136 GRYSSRPTTSHLCRETIRRWPHS 204
G YS + H CR ++ RWP++
Sbjct: 723 GDYSLQDRPQHHCRGSVGRWPNT 745
>SB_16975| Best HMM Match : MFS_1 (HMM E-Value=2.6e-24)
Length = 1193
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 243 R*SVDSFWML*SERVRPSSNCFPAKMRRCWS 151
R S+D++ + +R+R S C P R WS
Sbjct: 853 RRSMDTYCKVHLQRLRKGSQCLPGDTRSWWS 883
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 65 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 187
G T LEV D +NVKA + + I P ++ A L
Sbjct: 381 GMTKALEVITQDQRDNVKAVVVLSDAIDPSDTAVVLASLSL 421
>SB_1963| Best HMM Match : rve (HMM E-Value=0.022)
Length = 931
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +2
Query: 56 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 220
+L G I +++A IP DQ L F + LEDGR Y +
Sbjct: 535 SLVGVLIRFREHPVAIAADIEAMFMQCRVIPTDQPSLRFLWRDLEDGRRPDVYQM 589
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,805,063
Number of Sequences: 59808
Number of extensions: 272825
Number of successful extensions: 759
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 703143849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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