Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0232
(399 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 143 4e-35
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 143 4e-35
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 143 4e-35
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 143 4e-35
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 143 4e-35
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 143 4e-35
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 143 4e-35
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 143 4e-35
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 143 4e-35
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 143 4e-35
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 143 4e-35
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 143 4e-35
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 143 4e-35
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 143 4e-35
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 143 4e-35
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 143 4e-35
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 143 4e-35
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 143 4e-35
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 143 4e-35
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 143 4e-35
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 143 4e-35
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 141 1e-34
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 134 2e-32
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 113 4e-26
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 86 7e-18
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 67 5e-12
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 67 5e-12
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 64 4e-11
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 60 5e-10
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 60 5e-10
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 51 3e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 50 4e-07
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 50 6e-07
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 50 8e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 50 8e-07
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 49 1e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 2e-06
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 47 4e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 46 7e-06
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 46 7e-06
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 45 2e-05
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 45 2e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 5e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 44 5e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 44 5e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 44 5e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 44 5e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 44 5e-05
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 40 5e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 8e-04
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 40 8e-04
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 39 0.001
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 39 0.001
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 38 0.002
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.004
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 36 0.008
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 36 0.008
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 34 0.030
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 34 0.040
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 33 0.070
At4g27180.1 68417.m03904 kinesin-like protein B (KATB) 31 0.37
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 0.49
At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR ... 29 1.1
At1g47680.1 68414.m05297 hypothetical protein 29 1.5
At1g79350.1 68414.m09247 DNA-binding protein, putative contains ... 28 2.0
At3g46530.1 68416.m05051 disease resistance protein, RPP13-like ... 27 3.5
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 27 4.6
At3g47160.1 68416.m05120 expressed protein similar to MTD2 [Medi... 27 4.6
At5g43740.2 68418.m05348 disease resistance protein (CC-NBS-LRR ... 26 8.0
At5g43740.1 68418.m05347 disease resistance protein (CC-NBS-LRR ... 26 8.0
At4g05240.1 68417.m00791 ubiquitin family protein contains INTER... 26 8.0
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 289 IQKESTLHLVLRL 301
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 365 IQKESTLHLVLRL 377
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 289 IQKESTLHLVLRL 301
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 289 IQKESTLHLVLRL 301
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
Score = 64.9 bits (151), Expect = 2e-11
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKE 139
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 32.7 bits (71), Expect = 0.093
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 141 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 245
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 263 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 297
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 289 IQKESTLHLVLRL 301
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 365 IQKESTLHLVLRL 377
Score = 64.9 bits (151), Expect = 2e-11
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKE 139
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.093
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 141 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 245
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 289 IQKESTLHLVLRL 301
Score = 64.9 bits (151), Expect = 2e-11
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKE 139
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.093
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 141 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 245
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 289 IQKESTLHLVLRL 301
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 365 IQKESTLHLVLRL 377
Score = 64.9 bits (151), Expect = 2e-11
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKE 139
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.093
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 141 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 245
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 289 IQKESTLHLVLRL 301
Score = 64.9 bits (151), Expect = 2e-11
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKE 139
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.093
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 141 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 245
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 289 IQKESTLHLVLRL 301
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 137 IQKESTLHLVLRL 149
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 289 IQKESTLHLVLRL 301
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 89.0 bits (211), Expect = 1e-18
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = +1
Query: 256 RGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNGL 399
RGG IEPSL +LA KYN +KMICRKCYARLHPRA NCRK KCGH+N L
Sbjct: 74 RGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL 121
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 89.0 bits (211), Expect = 1e-18
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = +1
Query: 256 RGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNGL 399
RGG IEPSL +LA KYN +KMICRKCYARLHPRA NCRK KCGH+N L
Sbjct: 74 RGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQL 121
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 89.0 bits (211), Expect = 1e-18
Identities = 41/71 (57%), Positives = 54/71 (76%)
Frame = +2
Query: 44 IFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 223
I V TLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 224 KESTLHLVLRL 256
S LHLVL L
Sbjct: 139 GGSVLHLVLAL 149
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 140 bits (338), Expect = 4e-34
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 212 IQKESTLHLVLRL 224
Score = 136 bits (328), Expect = 7e-33
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 136 IQKESTLHLVLRL 148
Score = 99.5 bits (237), Expect = 7e-22
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 196
MQIFV TLTGKTITLEVE+S TI+NVKAKIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 143 bits (346), Expect = 4e-35
Identities = 69/77 (89%), Positives = 73/77 (94%)
Frame = +2
Query: 26 FSNTMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 205
F MQIFV TLTGKTITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 FRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 206 SDYNIQKESTLHLVLRL 256
+DYNIQKESTLHLVLRL
Sbjct: 133 ADYNIQKESTLHLVLRL 149
Score = 137 bits (331), Expect = 3e-33
Identities = 67/73 (91%), Positives = 70/73 (95%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGI PDQQRLIFAGKQ EDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 213 IQKESTLHLVLRL 225
Score = 126 bits (303), Expect = 7e-30
Identities = 59/72 (81%), Positives = 67/72 (93%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIF+ TLTGKT LEVE+SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLR 253
+Q++STLHL+LR
Sbjct: 61 VQEDSTLHLLLR 72
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
Score = 92.3 bits (219), Expect = 1e-19
Identities = 42/71 (59%), Positives = 55/71 (77%)
Frame = +2
Query: 44 IFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 223
I V TLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 224 KESTLHLVLRL 256
S LHLVL L
Sbjct: 139 GGSVLHLVLAL 149
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 143 bits (346), Expect = 4e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 61 IQKESTLHLVLRL 73
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 141 bits (342), Expect = 1e-34
Identities = 67/73 (91%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 139 IQKESTLHLVLRL 151
Score = 136 bits (328), Expect = 7e-33
Identities = 66/73 (90%), Positives = 69/73 (94%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLT KTI LEVE+SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 215 IQKESTLHLVLRL 227
Score = 128 bits (308), Expect = 2e-30
Identities = 65/74 (87%), Positives = 69/74 (93%), Gaps = 1/74 (1%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDY 214
MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE I PDQQRLIFAG+QLEDG TL+DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 215 NIQKESTLHLVLRL 256
NIQKESTLHLVLRL
Sbjct: 291 NIQKESTLHLVLRL 304
Score = 110 bits (265), Expect = 3e-25
Identities = 54/74 (72%), Positives = 63/74 (85%)
Frame = +2
Query: 35 TMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 214
+MQI TLT KTIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY
Sbjct: 2 SMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADY 61
Query: 215 NIQKESTLHLVLRL 256
+IQK+S LHL LRL
Sbjct: 62 SIQKDSILHLALRL 75
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 134 bits (324), Expect = 2e-32
Identities = 66/73 (90%), Positives = 70/73 (95%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV TLTGKTITLEV++SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 218 IQKESTLHLVLRL 256
IQKESTLHLVLRL
Sbjct: 139 IQKESTLHLVLRL 151
Score = 124 bits (300), Expect = 2e-29
Identities = 61/74 (82%), Positives = 67/74 (90%)
Frame = +2
Query: 35 TMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 214
T+QI+ TLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DY
Sbjct: 2 TIQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADY 61
Query: 215 NIQKESTLHLVLRL 256
NIQKESTLHLVLRL
Sbjct: 62 NIQKESTLHLVLRL 75
Score = 113 bits (271), Expect = 5e-26
Identities = 56/75 (74%), Positives = 63/75 (84%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIF+ TLTGKTI LEVE+SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG TL DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 218 IQKESTLHLVLRLEE 262
I K+STL+LVLRL +
Sbjct: 612 IHKKSTLYLVLRLRQ 626
Score = 106 bits (254), Expect = 6e-24
Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 2/88 (2%)
Frame = +2
Query: 2 SXILRVXYFSNTMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGI--PPDQQRLIFA 175
S + V F MQIFV TLT K I LEVE+ DTIENVKA +QDKEGI P+ QRLIF
Sbjct: 307 STLYLVTRFRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFL 366
Query: 176 GKQLEDGRTLSDYNIQKESTLHLVLRLE 259
GK+L+DG TL+DY+IQKESTLHLVL ++
Sbjct: 367 GKELKDGCTLADYSIQKESTLHLVLGMQ 394
Score = 102 bits (245), Expect = 8e-23
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
MQIFV GK ITLEV +SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 218 IQKESTLHLVLRL 256
I+ ESTLHL +
Sbjct: 453 IRNESTLHLFFHI 465
Score = 96.7 bits (230), Expect = 5e-21
Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 7/80 (8%)
Frame = +2
Query: 38 MQIFVXTLTGK-----TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL--EDG 196
MQIFV T +GK T+TL+VE+SDTIENVKAKIQD+EG+ PD QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 197 RTLSDYNIQKESTLHLVLRL 256
RTL+DY I+ STL L LRL
Sbjct: 215 RTLADYGIRNRSTLCLALRL 234
Score = 94.3 bits (224), Expect = 3e-20
Identities = 51/77 (66%), Positives = 57/77 (74%), Gaps = 5/77 (6%)
Frame = +2
Query: 38 MQIFVXTL-----TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 202
M IFV L TG+ LEVE+SDTI+NVKAK+QDKE IP D RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 203 LSDYNIQKESTLHLVLR 253
L+ YNIQK STL+LV R
Sbjct: 298 LAHYNIQKGSTLYLVTR 314
Score = 89.0 bits (211), Expect = 1e-18
Identities = 49/75 (65%), Positives = 54/75 (72%), Gaps = 7/75 (9%)
Frame = +2
Query: 38 MQIFVXTL-------TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 196
MQIFV T T KTITLEVE+SDTI+NVK KIQ K GIP D+QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 197 RTLSDYNIQKESTLH 241
RTL DYNIQK ST+H
Sbjct: 529 RTLLDYNIQKGSTIH 543
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 113 bits (272), Expect = 4e-26
Identities = 54/73 (73%), Positives = 61/73 (83%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
M IF+ TLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 218 IQKESTLHLVLRL 256
IQ +S LHL+ RL
Sbjct: 146 IQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 86.2 bits (204), Expect = 7e-18
Identities = 39/73 (53%), Positives = 53/73 (72%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
M+I V TLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 218 IQKESTLHLVLRL 256
+++ S LHLVL L
Sbjct: 61 LERGSVLHLVLAL 73
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 66.9 bits (156), Expect = 5e-12
Identities = 29/74 (39%), Positives = 49/74 (66%)
Frame = +2
Query: 32 NTMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 211
+T+++ + TL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+
Sbjct: 22 STLELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSE 81
Query: 212 YNIQKESTLHLVLR 253
Y+++ TLHL++R
Sbjct: 82 YHLENGHTLHLIVR 95
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 66.9 bits (156), Expect = 5e-12
Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 13/86 (15%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK------------ 181
M IF+ TLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSIN 109
Query: 182 -QLEDGRTLSDYNIQKESTLHLVLRL 256
++ D D I E T LVLRL
Sbjct: 110 LEVADSSDTIDLKINGEPTRQLVLRL 135
Score = 66.1 bits (154), Expect = 8e-12
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T+SDYN
Sbjct: 141 MRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYN 200
Query: 218 IQKESTL 238
I+ ++ L
Sbjct: 201 IKPDANL 207
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 63.7 bits (148), Expect = 4e-11
Identities = 31/81 (38%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +2
Query: 29 SNTMQIFVXTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 205
S +QIFV ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L
Sbjct: 92 STRLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSL 151
Query: 206 SDYNIQKESTLHLVLRLEEXQ 268
+ Y+I+++++L LV R++ +
Sbjct: 152 TYYSIEQDASLQLVARMQSTE 172
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 60.1 bits (139), Expect = 5e-10
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 23 YFSNTMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGR 199
Y +T+ I++ TL G I + V SD+IE+VK +IQ G Q+L+F G++L
Sbjct: 30 YPDDTIMIYL-TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNS 88
Query: 200 TLSDYNIQKESTLHLVLRLEEXQL 271
+ DY + + + LHLVL+L + Q+
Sbjct: 89 NMRDYGVSEGNILHLVLKLSDLQV 112
Score = 47.6 bits (108), Expect = 3e-06
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 17 VXYFSNTMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLE 190
V S+ + V T GK VE I VK +I K G + PD+Q +++ G++LE
Sbjct: 104 VLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLE 163
Query: 191 DGRTLSDYNIQKESTLHLVLR 253
D ++D +S LHL++R
Sbjct: 164 DQSLINDICRNDDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 60.1 bits (139), Expect = 5e-10
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 23 YFSNTMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGR 199
Y +T+ I++ TL G I + V SD+IE+VK +IQ G Q+L+F G++L
Sbjct: 30 YPDDTIMIYL-TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNS 88
Query: 200 TLSDYNIQKESTLHLVLRLEEXQL 271
+ DY + + + LHLVL+L + Q+
Sbjct: 89 NMRDYGVSEGNILHLVLKLSDLQV 112
Score = 47.6 bits (108), Expect = 3e-06
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 17 VXYFSNTMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLE 190
V S+ + V T GK VE I VK +I K G + PD+Q +++ G++LE
Sbjct: 104 VLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLE 163
Query: 191 DGRTLSDYNIQKESTLHLVLR 253
D ++D +S LHL++R
Sbjct: 164 DQSLINDICRNDDSVLHLLVR 184
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.8 bits (116), Expect = 3e-07
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 218 IQKESTLHL 244
I ES L L
Sbjct: 61 ILFESRLLL 69
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 50.4 bits (115), Expect = 4e-07
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +2
Query: 65 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 244
G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q + T+H+
Sbjct: 27 GTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTIHM 86
Query: 245 V 247
V
Sbjct: 87 V 87
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 50.0 bits (114), Expect = 6e-07
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 23 YFSNTMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGR 199
Y ++ +F+ +++G T+ + + SD+I VK +IQ G +Q+L+F+G++L +
Sbjct: 30 YSVKSVLVFL-SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNAS 88
Query: 200 TLSDYNIQKESTLHLVLRLEEXQL 271
+ DY + S LHLVL+L + L
Sbjct: 89 RVKDYGVTGGSVLHLVLKLYDPLL 112
Score = 35.9 bits (79), Expect = 0.010
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 44 IFVXTLTGKTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSDYN 217
+ V T GK V+ + +K +I ++ +G P D Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 218 IQKESTLHLVLR 253
S +HL+++
Sbjct: 173 KDGNSVIHLLVK 184
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 49.6 bits (113), Expect = 8e-07
Identities = 22/71 (30%), Positives = 45/71 (63%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 218 IQKESTLHLVL 250
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 49.6 bits (113), Expect = 8e-07
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +2
Query: 65 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 244
G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q + T+H+
Sbjct: 27 GTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTVHM 86
Query: 245 V 247
V
Sbjct: 87 V 87
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 48.8 bits (111), Expect = 1e-06
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +2
Query: 26 FSNTMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRT 202
F++ ++I + L T TL VE + + ++K I G+ P++Q RL+F G+ L++ +
Sbjct: 7 FTDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQR 66
Query: 203 LSDYNIQKESTLHLV 247
LSDY++++ TL+LV
Sbjct: 67 LSDYHVEEGHTLYLV 81
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 48.0 bits (109), Expect = 2e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 218 IQKESTL 238
I ES L
Sbjct: 61 ILFESLL 67
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 47.2 bits (107), Expect = 4e-06
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 56 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKES 232
T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY +
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 233 TLHLVLRLEEXQ 268
LHLV+RL + Q
Sbjct: 98 LLHLVIRLSDLQ 109
Score = 43.2 bits (97), Expect = 7e-05
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +2
Query: 17 VXYFSNTMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFAGKQL 187
V S+ I V T+ GK L VE S + VK +I KE GIP D + L G++L
Sbjct: 102 VIRLSDLQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEEL 160
Query: 188 EDGRTLSDYNIQKESTLHLVL 250
+D R ++D ++ +HL++
Sbjct: 161 DDQRLITDLCQNGDNVIHLLI 181
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 46.4 bits (105), Expect = 7e-06
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
M++ V +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 218 IQKESTLHL 244
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 46.4 bits (105), Expect = 7e-06
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 29 SNTMQIFVXTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 205
S +Q FV L GK++TL + E +K +I ++ IP QRLI G Q+ DG +
Sbjct: 6 SKPLQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAI 65
Query: 206 SDYNIQKESTLHLVLRL 256
S Q ++T++LVL L
Sbjct: 66 S----QPDATVNLVLSL 78
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 45.2 bits (102), Expect = 2e-05
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +2
Query: 35 TMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 211
TM+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 499 TMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAE 558
Query: 212 YNIQKESTLHLV 247
N+Q S +HL+
Sbjct: 559 QNVQPNSLVHLL 570
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 44.8 bits (101), Expect = 2e-05
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 208
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 209 DYNIQKESTLHLVLRL 256
DY I+ H+ R+
Sbjct: 61 DYKIKACDIFHMSDRM 76
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 43.6 bits (98), Expect = 5e-05
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
M +F T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 218 IQKESTLHLVLRLEEXQLN 274
I S + L + + N
Sbjct: 61 ILNHSRIQLSISSPDQSRN 79
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 43.6 bits (98), Expect = 5e-05
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 208
M++ V TL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 209 DYNIQKESTLHLVL 250
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 43.6 bits (98), Expect = 5e-05
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 208
M++ V TL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 209 DYNIQKESTLHLVL 250
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 43.6 bits (98), Expect = 5e-05
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 208
M++ V TL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 209 DYNIQKESTLHLVL 250
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 43.6 bits (98), Expect = 5e-05
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +2
Query: 35 TMQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 211
+M+I V +L GK L V +++ +++AK K + ++ + GK+L+D ++L+
Sbjct: 660 SMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAA 719
Query: 212 YNIQKESTLHLV 247
N+Q S +HL+
Sbjct: 720 QNVQPNSLVHLI 731
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 43.6 bits (98), Expect = 5e-05
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 208
M++ V TL G + V +DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 209 DYNIQKESTLHLVL 250
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 40.3 bits (90), Expect = 5e-04
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 214
+Q FV L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 215 NIQKESTLHLVLRL 256
Q ++T++LVL L
Sbjct: 67 --QSDTTMNLVLSL 78
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 39.5 bits (88), Expect = 8e-04
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
+++ + +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 218 IQKESTLHL 244
I+ S + L
Sbjct: 62 IRHNSRILL 70
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 39.5 bits (88), Expect = 8e-04
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 151
M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 217
+ + + +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 218 IQKESTLHL 244
I+ S + L
Sbjct: 96 IRHNSRILL 104
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +2
Query: 65 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 244
GK+I L V T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 245 V 247
+
Sbjct: 604 M 604
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 193
M +F T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.1 bits (82), Expect = 0.004
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG-KQLEDGRTLSDY 214
M+ V L G + LEV+ DT+ VK KI+ + IP +Q LI G L + T+
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDGIVILREDLTVEQC 60
Query: 215 NIQKESTLHLVLRLEEXQLN 274
I S + L + ++ N
Sbjct: 61 QIVPTSDIQLEVSSDDDNPN 80
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.3 bits (80), Expect = 0.008
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 80 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 193
L +EA+ T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 36.3 bits (80), Expect = 0.008
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 38 MQIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 178
M+ V L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 34.3 bits (75), Expect = 0.030
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 41 QIFVXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 202
++FV T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 33.9 bits (74), Expect = 0.040
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 50 VXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 193
V T++ + + ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 33.1 bits (72), Expect = 0.070
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +2
Query: 80 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 238
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At4g27180.1 68417.m03904 kinesin-like protein B (KATB)
Length = 745
Score = 30.7 bits (66), Expect = 0.37
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Frame = +2
Query: 77 TLEVEASDTIENVKAK--IQDKEGIPPDQQRLIFAGKQLE--DGRT---LSDYNIQKEST 235
T + + DTI +++K +Q+KE I Q +L+ + ++L+ D T ++++ QKES
Sbjct: 295 TKQNDFKDTINELESKCSVQNKE-IEELQDQLVASERKLQVADLSTFEKMNEFEEQKESI 353
Query: 236 LHLVLRLEEXQLNL 277
+ L RLEE +L L
Sbjct: 354 MELKGRLEEAELKL 367
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 30.3 bits (65), Expect = 0.49
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +2
Query: 95 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 235
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 236 LHLVLRL 256
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 941
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 172 CRETIRRWPHSFRL*HPERIHTSPGFETR 258
C+ETI+ W H+ + + H PG E R
Sbjct: 447 CKETIQEWHHAINVLNSPAGHKFPGMEER 475
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 89 EASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 244
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At1g79350.1 68414.m09247 DNA-binding protein, putative contains
Pfam PF00628: PHD-finger domain; contains TIGRFAMS
TIGR01053: zinc finger domain, LSD1 subclass; contains
Pfam PF00271: Helicase conserved C-terminal domain;
similar to WSSV086 (GI:19481678)[shrimp white spot
syndrome virus]; similar to nuclear protein Np95
(GI:17939938) [Mus musculus]
Length = 1299
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 269 IVPPLVSKPGEVWILSGCYSLKE 201
+VPP++ P E WI C+S KE
Sbjct: 731 VVPPVIDLPSEAWI---CFSCKE 750
>At3g46530.1 68416.m05051 disease resistance protein, RPP13-like
(CC-NBS class), putative domain signature CC-NBS exists,
suggestive of a disease resistance protein. Closest
homolog in Col-0 to RPP13.
Length = 835
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 172 KDETLLVWRNTFLVLDFSFDIFDSVGSFHLQ 80
+DE W LVLDF++D+ D + ++HL+
Sbjct: 54 EDEVSKEWSK--LVLDFAYDVEDVLDTYHLK 82
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 27.1 bits (57), Expect = 4.6
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 59 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 196
+TG T E DTI K ++ G P + ++F+G DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367
>At3g47160.1 68416.m05120 expressed protein similar to MTD2
[Medicago truncatula] GI:9294812; supporting cDNA
gi|25083983|gb|BT002136.1|
Length = 245
Score = 27.1 bits (57), Expect = 4.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 304 NCEKMICRKCYARLHPRATNC 366
NC +C KCY H R+ +C
Sbjct: 161 NCTHSLCIKCYRDWHGRSESC 181
>At5g43740.2 68418.m05348 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 862
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 172 CRETIRRWPHSFRL*HPERIHTSPGFETR 258
C+ETI+ W H+ + + H PG E R
Sbjct: 358 CKETIQEWSHAINVLNSAG-HEFPGMEER 385
>At5g43740.1 68418.m05347 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 862
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 172 CRETIRRWPHSFRL*HPERIHTSPGFETR 258
C+ETI+ W H+ + + H PG E R
Sbjct: 358 CKETIQEWSHAINVLNSAG-HEFPGMEER 385
>At4g05240.1 68417.m00791 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 197
Score = 26.2 bits (55), Expect = 8.0
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +2
Query: 50 VXTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 229
V L +E+ DT+ +K KI+ + I +Q L F G L+D + I
Sbjct: 62 VWKLPNYKFEIELGYWDTVLEIKQKIEKYQRILVYRQTLFFQGNVLQDHLDIEQCVILNH 121
Query: 230 STL 238
S L
Sbjct: 122 SLL 124
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,886,204
Number of Sequences: 28952
Number of extensions: 179567
Number of successful extensions: 717
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 575830496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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