Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0231
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 147 3e-36
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 147 3e-36
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 147 3e-36
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 146 8e-36
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 146 8e-36
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 93 8e-20
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 83 8e-17
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 77 1e-14
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 63 1e-10
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 63 1e-10
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 50 7e-07
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 45 3e-05
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 45 3e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 44 8e-05
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 40 0.001
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 38 0.006
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 36 0.017
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 36 0.017
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 35 0.029
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 35 0.029
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.039
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 34 0.052
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 33 0.12
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 29 1.5
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 29 2.6
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z99281-7|CAC42379.1| 77|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 27 7.8
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 27 7.8
V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy ch... 27 7.8
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 27 7.8
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRL 149
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLSDYNIQKESTLHLVLRL 225
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 274
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 275 GKQLEDGRTLSDYNIQKESTLHLVLRL 301
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 350
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 351 GKQLEDGRTLSDYNIQKESTLHLVLRL 377
Score = 146 bits (354), Expect = 8e-36
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 145 bits (351), Expect = 2e-35
Identities = 74/87 (85%), Positives = 77/87 (88%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 426
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 427 GKQLEDGRTLSDYNIQKESTLHLVLRL 453
Score = 98.7 bits (235), Expect = 2e-21
Identities = 50/61 (81%), Positives = 53/61 (86%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 443 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 502
Query: 181 G 183
G
Sbjct: 503 G 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRL 149
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLSDYNIQKESTLHLVLRL 225
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 274
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 275 GKQLEDGRTLSDYNIQKESTLHLVLRL 301
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 350
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 351 GKQLEDGRTLSDYNIQKESTLHLVLRL 377
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 443 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 502
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 503 GKQLEDGRTLSDYNIQKESTLHLVLRL 529
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 519 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 578
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 579 GKQLEDGRTLSDYNIQKESTLHLVLRL 605
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 595 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 654
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 655 GKQLEDGRTLSDYNIQKESTLHLVLRL 681
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 671 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 730
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 731 GKQLEDGRTLSDYNIQKESTLHLVLRL 757
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 747 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 806
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 807 GKQLEDGRTLSDYNIQKESTLHLVLRL 833
Score = 146 bits (354), Expect = 8e-36
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 145 bits (351), Expect = 2e-35
Identities = 74/87 (85%), Positives = 77/87 (88%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 426
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 427 GKQLEDGRTLSDYNIQKESTLHLVLRL 453
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRL 149
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLSDYNIQKESTLHLVLRL 225
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 274
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 275 GKQLEDGRTLSDYNIQKESTLHLVLRL 301
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 350
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 351 GKQLEDGRTLSDYNIQKESTLHLVLRL 377
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 426
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 427 GKQLEDGRTLSDYNIQKESTLHLVLRL 453
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 443 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 502
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 503 GKQLEDGRTLSDYNIQKESTLHLVLRL 529
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 519 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 578
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 579 GKQLEDGRTLSDYNIQKESTLHLVLRL 605
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 595 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 654
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 655 GKQLEDGRTLSDYNIQKESTLHLVLRL 681
Score = 147 bits (357), Expect = 3e-36
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 671 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 730
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQKESTLHLVL L
Sbjct: 731 GKQLEDGRTLSDYNIQKESTLHLVLRL 757
Score = 146 bits (354), Expect = 8e-36
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 146 bits (354), Expect = 8e-36
Identities = 74/87 (85%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA
Sbjct: 747 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 806
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTLSDYNIQK+STLHLVL L
Sbjct: 807 GKQLEDGRTLSDYNIQKQSTLHLVLRL 833
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 146 bits (354), Expect = 8e-36
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 93.9 bits (223), Expect = 6e-20
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +3
Query: 255 RLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLR 407
RLRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++ LR
Sbjct: 72 RLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSELR 122
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 146 bits (354), Expect = 8e-36
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 93.9 bits (223), Expect = 6e-20
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +3
Query: 255 RLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLR 407
RLRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++ LR
Sbjct: 72 RLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSELR 122
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 93.5 bits (222), Expect = 8e-20
Identities = 43/73 (58%), Positives = 55/73 (75%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
M I VKTLTGK I L++E +D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 223 IQKESTLHLVLDL 261
+ S LHLVL L
Sbjct: 61 VLGGSVLHLVLAL 73
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 83.4 bits (197), Expect = 8e-17
Identities = 37/70 (52%), Positives = 51/70 (72%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
+ + VKTL GKTI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE+ R L YN
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 223 IQKESTLHLV 252
I+ E +HLV
Sbjct: 221 IRDEDIIHLV 230
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +1
Query: 64 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 243
+TG IT VEASD I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 244 HLVLDLEE 267
L + ++E
Sbjct: 152 RLEVPVKE 159
Score = 37.5 bits (83), Expect = 0.006
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +1
Query: 34 SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 150
S TM + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 56 SKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 76.6 bits (180), Expect = 1e-14
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 153
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 62.9 bits (146), Expect = 1e-10
Identities = 33/71 (46%), Positives = 51/71 (71%)
Frame = +1
Query: 49 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 228
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 229 KESTLHLVLDL 261
E+T+++ L+L
Sbjct: 57 SEATIYVNLEL 67
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 62.9 bits (146), Expect = 1e-10
Identities = 33/71 (46%), Positives = 51/71 (71%)
Frame = +1
Query: 49 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 228
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 229 KESTLHLVLDL 261
E+T+++ L+L
Sbjct: 57 SEATIYVNLEL 67
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 56.4 bits (130), Expect = 1e-08
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +1
Query: 46 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 225
QIFVK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 226 QKESTL 243
QK ST+
Sbjct: 214 QKSSTI 219
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 50.4 bits (115), Expect = 7e-07
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLS 213
++I+V+ G+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+ D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 214 DYNIQKESTLHLVLDLEE 267
D + + STL L + +E+
Sbjct: 162 DNSFENGSTLRLEVSIEK 179
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 150
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 25 VYFSNTMQIFVKTLTGKTITLEV 93
V + +FVKT TGKTIT+ +
Sbjct: 175 VSIEKEIDVFVKTYTGKTITISI 197
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/68 (41%), Positives = 36/68 (52%)
Frame = +1
Query: 46 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 225
Q FV+ L GKT TL V ASDT+E K ++ R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 226 QKESTLHL 249
ST+ L
Sbjct: 99 SNNSTMDL 106
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +1
Query: 49 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 186
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 43.6 bits (98), Expect = 8e-05
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = +1
Query: 67 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 246
+G L V SDTI VK I + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 247 L 249
L
Sbjct: 241 L 241
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +1
Query: 85 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLDLE 264
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 85 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 243
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 216
+ + +TLT LE+ TI VKA + ++G P+ Q+LI+ GK L+D + +
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVGE 111
Query: 217 YNIQKESTLHLVLDLEEV 270
+ ++L +V
Sbjct: 112 VGFDSSKFVVVMLSKRKV 129
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 35.9 bits (79), Expect = 0.017
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +1
Query: 64 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 243
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 244 HL 249
+L
Sbjct: 644 YL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 35.9 bits (79), Expect = 0.017
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +1
Query: 64 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 243
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 244 HL 249
+L
Sbjct: 644 YL 645
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 35.1 bits (77), Expect = 0.029
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +1
Query: 40 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 219
T+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 20 TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 220 NIQKESTLHLV 252
I T+HLV
Sbjct: 80 GISDGQTVHLV 90
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 35.1 bits (77), Expect = 0.029
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +1
Query: 40 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 219
T+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 20 TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 220 NIQKESTLHLV 252
I T+HLV
Sbjct: 80 GISDGQTVHLV 90
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 34.7 bits (76), Expect = 0.039
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 61 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 219
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = +1
Query: 58 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 237
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 238 TLHLV 252
+ L+
Sbjct: 73 QIMLL 77
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +1
Query: 64 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 243
L G I +E+++ DTI V + G+ +QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 327 CRKCYARLHPRATNCRKTKCGHT 395
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 29.5 bits (63), Expect = 1.5
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 219
M + +KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 220 NIQK 231
IQ+
Sbjct: 56 KIQE 59
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/54 (20%), Positives = 29/54 (53%)
Frame = +1
Query: 37 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 198
+ +Q+ + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1147 DVLQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 243 SPGFRLRGGTIEPSLRILAMKYNCE 317
SPGF ++ G E + + +A YNCE
Sbjct: 208 SPGFLIQRGATEAATKSIAYYYNCE 232
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 85 LEVEASDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 249
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYL 155
>Z99281-7|CAC42379.1| 77|Caenorhabditis elegans Hypothetical
protein Y57G11C.9c protein.
Length = 77
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 60 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 161
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 60 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 161
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 60 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 161
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 160 QQRLIFAGKQLEDGRTLSDYNIQKESTL-HLVLDLEE 267
QQ+L KQ+E+ L++ N+QK L H + D EE
Sbjct: 1881 QQKLKTQKKQVEEAEELANLNLQKYKQLTHQLEDAEE 1917
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 160 QQRLIFAGKQLEDGRTLSDYNIQKESTL-HLVLDLEE 267
QQ+L KQ+E+ L++ N+QK L H + D EE
Sbjct: 1881 QQKLKTQKKQVEEAEELANLNLQKYKQLTHQLEDAEE 1917
>V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy chain
protein.
Length = 91
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 160 QQRLIFAGKQLEDGRTLSDYNIQKESTL-HLVLDLEE 267
QQ+L KQ+E+ L++ N+QK L H + D EE
Sbjct: 9 QQKLKTQKKQVEEAEELANLNLQKYKQLTHQLEDAEE 45
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 160 QQRLIFAGKQLEDGRTLSDYNIQKESTL-HLVLDLEE 267
QQ+L KQ+E+ L++ N+QK L H + D EE
Sbjct: 1884 QQKLKTQKKQVEEAEELANLNLQKYKQLTHQLEDAEE 1920
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,032,845
Number of Sequences: 27780
Number of extensions: 254311
Number of successful extensions: 731
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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