Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0230
         (399 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z97634-12|CAI95599.1|  195|Homo sapiens non-metastatic cells 4, ...    37   0.021
Z97634-14|CAM26405.1|  168|Homo sapiens non-metastatic cells 4, ...    31   1.9  
Z97634-13|CAC37288.1|  187|Homo sapiens non-metastatic cells 4, ...    31   1.9  
Z97634-10|CAO77937.1|  233|Homo sapiens non-metastatic cells 4, ...    31   1.9  
Y07604-1|CAA68877.1|  187|Homo sapiens nucleoside-diphosphate ki...    31   1.9  
BT019438-1|AAV38245.1|  187|Homo sapiens non-metastatic cells 4,...    31   1.9  
BC017067-1|AAH17067.1|  187|Homo sapiens non-metastatic cells 4,...    31   1.9  
BC004880-1|AAH04880.1|  187|Homo sapiens non-metastatic cells 4,...    31   1.9  
AL023881-7|CAO77957.1|  233|Homo sapiens non-metastatic cells 4,...    31   1.9  
AE006463-10|AAK61230.1|  187|Homo sapiens nucleoside diphosphate...    31   1.9  
Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain prot...    29   5.7  
X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain pro...    29   5.7  
S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain prot...    29   5.7  

>Z97634-12|CAI95599.1|  195|Homo sapiens non-metastatic cells 4,
           protein expressed in protein.
          Length = 195

 Score = 37.1 bits (82), Expect = 0.021
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = -3

Query: 229 LNRGPRSPGPL*RCRHGCSCPFXQFS*RSSTWAREQHWSCSKPAPERRRRIGSL 68
           L  GPR+PGP    RHG   P      R  +W RE+     KP   +RR +G +
Sbjct: 13  LRCGPRAPGPSLLVRHGSGLPPSALK-RGPSWTRERTLVAVKPDGVQRRLVGDV 65


>Z97634-14|CAM26405.1|  168|Homo sapiens non-metastatic cells 4,
           protein expressed in protein.
          Length = 168

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -3

Query: 229 LNRGPRSPGPL*RCRHGCSCPFXQFS*RSSTWAREQHWSCSKPAPERRRRIGSL 68
           L  GPR+PGP    RHG   P         +W RE+     KP   +RR +G +
Sbjct: 8   LRCGPRAPGPSLLVRHGSGGP---------SWTRERTLVAVKPDGVQRRLVGDV 52


>Z97634-13|CAC37288.1|  187|Homo sapiens non-metastatic cells 4,
           protein expressed in protein.
          Length = 187

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -3

Query: 229 LNRGPRSPGPL*RCRHGCSCPFXQFS*RSSTWAREQHWSCSKPAPERRRRIGSL 68
           L  GPR+PGP    RHG   P         +W RE+     KP   +RR +G +
Sbjct: 13  LRCGPRAPGPSLLVRHGSGGP---------SWTRERTLVAVKPDGVQRRLVGDV 57


>Z97634-10|CAO77937.1|  233|Homo sapiens non-metastatic cells 4,
           protein expressed in protein.
          Length = 233

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -3

Query: 229 LNRGPRSPGPL*RCRHGCSCPFXQFS*RSSTWAREQHWSCSKPAPERRRRIGSL 68
           L  GPR+PGP    RHG   P         +W RE+     KP   +RR +G +
Sbjct: 13  LRCGPRAPGPSLLVRHGSGGP---------SWTRERTLVAVKPDGVQRRLVGDV 57


>Y07604-1|CAA68877.1|  187|Homo sapiens nucleoside-diphosphate
           kinase protein.
          Length = 187

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -3

Query: 229 LNRGPRSPGPL*RCRHGCSCPFXQFS*RSSTWAREQHWSCSKPAPERRRRIGSL 68
           L  GPR+PGP    RHG   P         +W RE+     KP   +RR +G +
Sbjct: 13  LRCGPRAPGPSLLVRHGSGGP---------SWTRERTLVAVKPDGVQRRLVGDV 57


>BT019438-1|AAV38245.1|  187|Homo sapiens non-metastatic cells 4,
           protein expressed in protein.
          Length = 187

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -3

Query: 229 LNRGPRSPGPL*RCRHGCSCPFXQFS*RSSTWAREQHWSCSKPAPERRRRIGSL 68
           L  GPR+PGP    RHG   P         +W RE+     KP   +RR +G +
Sbjct: 13  LRCGPRAPGPSLLVRHGSGGP---------SWTRERTLVAVKPDGVQRRLVGDV 57


>BC017067-1|AAH17067.1|  187|Homo sapiens non-metastatic cells 4,
           protein expressed in protein.
          Length = 187

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -3

Query: 229 LNRGPRSPGPL*RCRHGCSCPFXQFS*RSSTWAREQHWSCSKPAPERRRRIGSL 68
           L  GPR+PGP    RHG   P         +W RE+     KP   +RR +G +
Sbjct: 13  LRCGPRAPGPSLLVRHGSGGP---------SWTRERTLVAVKPDGVQRRLVGDV 57


>BC004880-1|AAH04880.1|  187|Homo sapiens non-metastatic cells 4,
           protein expressed in protein.
          Length = 187

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -3

Query: 229 LNRGPRSPGPL*RCRHGCSCPFXQFS*RSSTWAREQHWSCSKPAPERRRRIGSL 68
           L  GPR+PGP    RHG   P         +W RE+     KP   +RR +G +
Sbjct: 13  LRCGPRAPGPSLLVRHGSGGP---------SWTRERTLVAVKPDGVQRRLVGDV 57


>AL023881-7|CAO77957.1|  233|Homo sapiens non-metastatic cells 4,
           protein expressed in protein.
          Length = 233

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -3

Query: 229 LNRGPRSPGPL*RCRHGCSCPFXQFS*RSSTWAREQHWSCSKPAPERRRRIGSL 68
           L  GPR+PGP    RHG   P         +W RE+     KP   +RR +G +
Sbjct: 13  LRCGPRAPGPSLLVRHGSGGP---------SWTRERTLVAVKPDGVQRRLVGDV 57


>AE006463-10|AAK61230.1|  187|Homo sapiens nucleoside diphosphate
           kinase : NDKM protein.
          Length = 187

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -3

Query: 229 LNRGPRSPGPL*RCRHGCSCPFXQFS*RSSTWAREQHWSCSKPAPERRRRIGSL 68
           L  GPR+PGP    RHG   P         +W RE+     KP   +RR +G +
Sbjct: 13  LRCGPRAPGPSLLVRHGSGGP---------SWTRERTLVAVKPDGVQRRLVGDV 57


>Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain
           protein.
          Length = 1798

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 230 AEPRTSIAGPALTMPSRMFLPIXSIFLKIFHXGSGAAL 117
           A+P T  +GP L + S + LP   + L++F  G  AAL
Sbjct: 702 AQPETPYSGPGLLIDSLVLLP-RVLVLEMFSGGDAAAL 738


>X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain
           protein.
          Length = 1798

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 230 AEPRTSIAGPALTMPSRMFLPIXSIFLKIFHXGSGAAL 117
           A+P T  +GP L + S + LP   + L++F  G  AAL
Sbjct: 702 AQPETPYSGPGLLIDSLVLLP-RVLVLEMFSGGDAAAL 738


>S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain
           protein.
          Length = 1798

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 230 AEPRTSIAGPALTMPSRMFLPIXSIFLKIFHXGSGAAL 117
           A+P T  +GP L + S + LP   + L++F  G  AAL
Sbjct: 702 AQPETPYSGPGLLIDSLVLLP-RVLVLEMFSGGDAAAL 738


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,213,188
Number of Sequences: 237096
Number of extensions: 793392
Number of successful extensions: 1540
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1540
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)