Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0222
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    54   8e-10
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    27   0.082

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 54.0 bits (124), Expect = 8e-10
 Identities = 25/80 (31%), Positives = 51/80 (63%)
 Frame = +3

Query: 9   DISKNIVEYLKGHQLEDVDVDDLMRRYTNXVIASAGFGLQVNSLVDKDNXFXECXQXMFS 188
           + ++N V++ +G + +DV++ ++  R++N VIA+A FG++VNS+ + +N F    + + +
Sbjct: 109 ECAENFVDFFQGRE-QDVEIKEVFSRFSNDVIATAAFGIRVNSVQEPNNEFYAMGRSLTT 167

Query: 189 TSXPQRFKMILAAQFPTLAK 248
            S  Q  K+ LA   P +A+
Sbjct: 168 FSAFQILKIFLAHLVPKIAE 187



 Score = 38.7 bits (86), Expect = 3e-05
 Identities = 22/58 (37%), Positives = 30/58 (51%)
 Frame = +2

Query: 263 VFPQKVTRFFREIVXXTMXYXLKDNXERPDMIQLLMDAYKGXPXNXXXXSDGKNVGFA 436
           V P+KVT FF  ++   M     +   RPD+I LLM+A KG   +      G+  GFA
Sbjct: 193 VLPRKVTDFFEGLILDNMQKREAEKIVRPDLIHLLMEARKGKLKHDNSNEGGE--GFA 248


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 27.5 bits (58), Expect = 0.082
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +3

Query: 3   MXDISKNIVEYLKGHQLEDVDVDDLMRRYTNXVIASAGFGL 125
           M +   ++  +L+ H  E++DV   M++Y+  +I++  FG+
Sbjct: 146 MQECVDDLRRFLEDHT-EEIDVKTAMKKYSVDIISTCAFGI 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,933
Number of Sequences: 336
Number of extensions: 1050
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)