Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0222
         (548 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D34625-1|BAA07011.1|  533|Homo sapiens thromboxane synthase prot...    31   3.5  
BC041157-1|AAH41157.1|  534|Homo sapiens thromboxane A synthase ...    31   3.5  
BC014117-1|AAH14117.1|  466|Homo sapiens TBXAS1 protein protein.       31   3.5  
AK223466-1|BAD97186.1|  534|Homo sapiens thromboxane A synthase ...    31   3.5  
AC004914-2|AAP21887.1|  311|Homo sapiens unknown protein.              31   3.5  
AC004914-1|AAD21788.1|  348|Homo sapiens unknown protein.              31   3.5  

>D34625-1|BAA07011.1|  533|Homo sapiens thromboxane synthase
           protein.
          Length = 533

 Score = 30.7 bits (66), Expect = 3.5
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = +3

Query: 24  IVEYLKGHQLEDVDVDDLMR---RYTNXVIASAGFGLQVNSLVDKDNXFXECXQXMFSTS 194
           ++ +LK +  E  D  D+ R    YT  V+AS  FG  V+S    ++ F +  +  F   
Sbjct: 162 LLAHLKRYA-ESGDAFDIQRCYCNYTTDVVASVAFGTPVDSWQAPEDPFVKHCKRFFEFC 220

Query: 195 XPQRFKMILAAQFPTL 242
            P+   ++L   FP++
Sbjct: 221 IPRPI-LVLLLSFPSI 235


>BC041157-1|AAH41157.1|  534|Homo sapiens thromboxane A synthase 1
           (platelet, cytochrome P450, family 5, subfamily A)
           protein.
          Length = 534

 Score = 30.7 bits (66), Expect = 3.5
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = +3

Query: 24  IVEYLKGHQLEDVDVDDLMR---RYTNXVIASAGFGLQVNSLVDKDNXFXECXQXMFSTS 194
           ++ +LK +  E  D  D+ R    YT  V+AS  FG  V+S    ++ F +  +  F   
Sbjct: 163 LLAHLKRYA-ESGDAFDIQRCYCNYTTDVVASVAFGTPVDSWQAPEDPFVKHCKRFFEFC 221

Query: 195 XPQRFKMILAAQFPTL 242
            P+   ++L   FP++
Sbjct: 222 IPRPI-LVLLLSFPSI 236


>BC014117-1|AAH14117.1|  466|Homo sapiens TBXAS1 protein protein.
          Length = 466

 Score = 30.7 bits (66), Expect = 3.5
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = +3

Query: 24  IVEYLKGHQLEDVDVDDLMR---RYTNXVIASAGFGLQVNSLVDKDNXFXECXQXMFSTS 194
           ++ +LK +  E  D  D+ R    YT  V+AS  FG  V+S    ++ F +  +  F   
Sbjct: 95  LLAHLKRYA-ESGDAFDIQRCYCNYTTDVVASVAFGTPVDSWQAPEDPFVKHCKRFFEFC 153

Query: 195 XPQRFKMILAAQFPTL 242
            P+   ++L   FP++
Sbjct: 154 IPRPI-LVLLLSFPSI 168


>AK223466-1|BAD97186.1|  534|Homo sapiens thromboxane A synthase 1
           (platelet, cytochrome P450, family 5, subfamily A) iso
           protein.
          Length = 534

 Score = 30.7 bits (66), Expect = 3.5
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = +3

Query: 24  IVEYLKGHQLEDVDVDDLMR---RYTNXVIASAGFGLQVNSLVDKDNXFXECXQXMFSTS 194
           ++ +LK +  E  D  D+ R    YT  V+AS  FG  V+S    ++ F +  +  F   
Sbjct: 163 LLAHLKRYA-ESGDAFDIQRCYCNYTTDVVASVAFGTPVDSWQAPEDPFVKHCKRFFEFC 221

Query: 195 XPQRFKMILAAQFPTL 242
            P+   ++L   FP++
Sbjct: 222 IPRPI-LVLLLSFPSI 236


>AC004914-2|AAP21887.1|  311|Homo sapiens unknown protein.
          Length = 311

 Score = 30.7 bits (66), Expect = 3.5
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = +3

Query: 24  IVEYLKGHQLEDVDVDDLMR---RYTNXVIASAGFGLQVNSLVDKDNXFXECXQXMFSTS 194
           ++ +LK +  E  D  D+ R    YT  V+AS  FG  V+S    ++ F +  +  F   
Sbjct: 95  LLAHLKRYA-ESGDAFDIQRCYCNYTTDVVASVAFGTPVDSWQAPEDPFVKHCKRFFEFC 153

Query: 195 XPQRFKMILAAQFPTL 242
            P+   ++L   FP++
Sbjct: 154 IPRPI-LVLLLSFPSI 168


>AC004914-1|AAD21788.1|  348|Homo sapiens unknown protein.
          Length = 348

 Score = 30.7 bits (66), Expect = 3.5
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = +3

Query: 24  IVEYLKGHQLEDVDVDDLMR---RYTNXVIASAGFGLQVNSLVDKDNXFXECXQXMFSTS 194
           ++ +LK +  E  D  D+ R    YT  V+AS  FG  V+S    ++ F +  +  F   
Sbjct: 132 LLAHLKRYA-ESGDAFDIQRCYCNYTTDVVASVAFGTPVDSWQAPEDPFVKHCKRFFEFC 190

Query: 195 XPQRFKMILAAQFPTL 242
            P+   ++L   FP++
Sbjct: 191 IPRPI-LVLLLSFPSI 205


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,890,544
Number of Sequences: 237096
Number of extensions: 629528
Number of successful extensions: 570
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)