Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0220
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   1.8  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    21   7.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.4  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +2

Query: 2   FVHFKWEYYQLYK*ELSQYLSHKMAAIH*KLKLLA 106
           +V+F+  YY+L K +LS +  +K   +   L LLA
Sbjct: 162 WVNFERIYYKLTKKKLSVFFGNKPVILTVVLPLLA 196


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +2

Query: 311 NFTIQRRFL*CPXVESVRRFRPXPV 385
           N T+Q ++L    +E++R + P P+
Sbjct: 40  NDTLQMKYLERVLLETLRMYPPVPI 64


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 327 LCMVKLTGYQFF 292
           +C+V L  YQFF
Sbjct: 22  VCLVPLNPYQFF 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,875
Number of Sequences: 336
Number of extensions: 2201
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)