Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0220
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase (ubiqu... 98 2e-20
BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase (ubi... 98 2e-20
BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase (ubi... 98 2e-20
BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase (ubi... 98 2e-20
BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH dehydro... 98 2e-20
AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone oxidore... 98 2e-20
>L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase
(ubiquinone) protein.
Length = 375
Score = 97.9 bits (233), Expect = 2e-20
Identities = 44/100 (44%), Positives = 68/100 (68%)
Frame = +3
Query: 246 FRLTGFVGRXVCNKLGKIGTQLILPYRGDFYDAXRLKVCGDLGXVLFTPYHLXDEESIAK 425
F TGF+GR V N LG++G+Q+I+PYR D YD L+ GDLG +LF + D++SI +
Sbjct: 57 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 116
Query: 426 XXRYSNGVINLVGRDYETKXFXYNDVHXXVLEELPESAEK 545
++SN VINL+GRD+ETK F + DV + + + + +++
Sbjct: 117 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 156
Score = 32.3 bits (70), Expect = 1.2
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1
Query: 187 AAYKRGTGGRSSFNGIVATVFG 252
A G GGRSS +GIVATVFG
Sbjct: 37 ALMPHGKGGRSSVSGIVATVFG 58
>BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 97.9 bits (233), Expect = 2e-20
Identities = 44/100 (44%), Positives = 68/100 (68%)
Frame = +3
Query: 246 FRLTGFVGRXVCNKLGKIGTQLILPYRGDFYDAXRLKVCGDLGXVLFTPYHLXDEESIAK 425
F TGF+GR V N LG++G+Q+I+PYR D YD L+ GDLG +LF + D++SI +
Sbjct: 59 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 118
Query: 426 XXRYSNGVINLVGRDYETKXFXYNDVHXXVLEELPESAEK 545
++SN VINL+GRD+ETK F + DV + + + + +++
Sbjct: 119 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 32.3 bits (70), Expect = 1.2
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1
Query: 187 AAYKRGTGGRSSFNGIVATVFG 252
A G GGRSS +GIVATVFG
Sbjct: 39 ALMPHGKGGRSSVSGIVATVFG 60
>BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 97.9 bits (233), Expect = 2e-20
Identities = 44/100 (44%), Positives = 68/100 (68%)
Frame = +3
Query: 246 FRLTGFVGRXVCNKLGKIGTQLILPYRGDFYDAXRLKVCGDLGXVLFTPYHLXDEESIAK 425
F TGF+GR V N LG++G+Q+I+PYR D YD L+ GDLG +LF + D++SI +
Sbjct: 59 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 118
Query: 426 XXRYSNGVINLVGRDYETKXFXYNDVHXXVLEELPESAEK 545
++SN VINL+GRD+ETK F + DV + + + + +++
Sbjct: 119 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 32.3 bits (70), Expect = 1.2
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1
Query: 187 AAYKRGTGGRSSFNGIVATVFG 252
A G GGRSS +GIVATVFG
Sbjct: 39 ALMPHGKGGRSSVSGIVATVFG 60
>BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 97.9 bits (233), Expect = 2e-20
Identities = 44/100 (44%), Positives = 68/100 (68%)
Frame = +3
Query: 246 FRLTGFVGRXVCNKLGKIGTQLILPYRGDFYDAXRLKVCGDLGXVLFTPYHLXDEESIAK 425
F TGF+GR V N LG++G+Q+I+PYR D YD L+ GDLG +LF + D++SI +
Sbjct: 59 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 118
Query: 426 XXRYSNGVINLVGRDYETKXFXYNDVHXXVLEELPESAEK 545
++SN VINL+GRD+ETK F + DV + + + + +++
Sbjct: 119 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 32.3 bits (70), Expect = 1.2
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1
Query: 187 AAYKRGTGGRSSFNGIVATVFG 252
A G GGRSS +GIVATVFG
Sbjct: 39 ALMPHGKGGRSSVSGIVATVFG 60
>BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH
dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 (39kD)
protein.
Length = 338
Score = 97.9 bits (233), Expect = 2e-20
Identities = 44/100 (44%), Positives = 68/100 (68%)
Frame = +3
Query: 246 FRLTGFVGRXVCNKLGKIGTQLILPYRGDFYDAXRLKVCGDLGXVLFTPYHLXDEESIAK 425
F TGF+GR V N LG++G+Q+I+PYR D YD L+ GDLG +LF + D++SI +
Sbjct: 20 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 79
Query: 426 XXRYSNGVINLVGRDYETKXFXYNDVHXXVLEELPESAEK 545
++SN VINL+GRD+ETK F + DV + + + + +++
Sbjct: 80 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 119
Score = 31.9 bits (69), Expect = 1.5
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 202 GTGGRSSFNGIVATVFG 252
G GGRSS +GIVATVFG
Sbjct: 5 GKGGRSSVSGIVATVFG 21
>AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone
oxidoreductase 39kDa subunit protein.
Length = 377
Score = 97.9 bits (233), Expect = 2e-20
Identities = 44/100 (44%), Positives = 68/100 (68%)
Frame = +3
Query: 246 FRLTGFVGRXVCNKLGKIGTQLILPYRGDFYDAXRLKVCGDLGXVLFTPYHLXDEESIAK 425
F TGF+GR V N LG++G+Q+I+PYR D YD L+ GDLG +LF + D++SI +
Sbjct: 59 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 118
Query: 426 XXRYSNGVINLVGRDYETKXFXYNDVHXXVLEELPESAEK 545
++SN VINL+GRD+ETK F + DV + + + + +++
Sbjct: 119 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 32.3 bits (70), Expect = 1.2
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1
Query: 187 AAYKRGTGGRSSFNGIVATVFG 252
A G GGRSS +GIVATVFG
Sbjct: 39 ALMPHGKGGRSSVSGIVATVFG 60
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,435,433
Number of Sequences: 237096
Number of extensions: 1363947
Number of successful extensions: 5466
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5466
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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