Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0220
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3380|AAF51613.1|  416|Drosophila melanogaster CG6020-PA...   120   1e-27
BT004491-1|AAO42655.1|  327|Drosophila melanogaster GM13757p pro...    85   5e-17
BT029034-1|ABJ16967.1|  324|Drosophila melanogaster IP02858p pro...    44   1e-04

>AE014296-3380|AAF51613.1|  416|Drosophila melanogaster CG6020-PA
           protein.
          Length = 416

 Score =  120 bits (289), Expect = 1e-27
 Identities = 60/100 (60%), Positives = 68/100 (68%)
 Frame = +3

Query: 246 FRLTGFVGRXVCNKLGKIGTQLILPYRGDFYDAXRLKVCGDLGXVLFTPYHLXDEESIAK 425
           F  TGFVGR VCNKLGK GTQ+ILPYRGD  D  RLKV GDLG VLF  Y+L D  SI  
Sbjct: 69  FGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPASIRD 128

Query: 426 XXRYSNGVINLVGRDYETKXFXYNDVHXXVLEELPESAEK 545
             ++SN VINLVGRD+ETK F + DVH    E +   A +
Sbjct: 129 AVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIARE 168



 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = +1

Query: 187 AAYKRGTGGRSSFNGIVATVFG 252
           AA KRGTGGRSSFNGIVATVFG
Sbjct: 49  AAMKRGTGGRSSFNGIVATVFG 70


>BT004491-1|AAO42655.1|  327|Drosophila melanogaster GM13757p
           protein.
          Length = 327

 Score = 85.4 bits (202), Expect = 5e-17
 Identities = 43/79 (54%), Positives = 51/79 (64%)
 Frame = +3

Query: 309 LILPYRGDFYDAXRLKVCGDLGXVLFTPYHLXDEESIAKXXRYSNGVINLVGRDYETKXF 488
           +ILPYRGD  D  RLKV GDLG VLF  Y+L D  SI    ++SN VINLVGRD+ETK F
Sbjct: 1   MILPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNF 60

Query: 489 XYNDVHXXVLEELPESAEK 545
            + DVH    E +   A +
Sbjct: 61  KFKDVHVNGAERIARIARE 79


>BT029034-1|ABJ16967.1|  324|Drosophila melanogaster IP02858p
           protein.
          Length = 324

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = +3

Query: 414 SIAKXXRYSNGVINLVGRDYETKXFXYNDVHXXVLEELPESAEK 545
           SI    ++SN VINLVGRD+ETK F + DVH    E +   A +
Sbjct: 33  SIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIARE 76


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,378,865
Number of Sequences: 53049
Number of extensions: 394961
Number of successful extensions: 838
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)