Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0216
         (618 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132918-1|AAI32919.1|  317|Homo sapiens similar to 4931415M17 p...    62   2e-09
BC132916-1|AAI32917.1|  317|Homo sapiens similar to 4931415M17 p...    62   2e-09
AK097419-1|BAC05044.1|  271|Homo sapiens protein ( Homo sapiens ...    62   2e-09
BC129999-1|AAI30000.1|  216|Homo sapiens LOC730112 protein protein.    53   7e-07

>BC132918-1|AAI32919.1|  317|Homo sapiens similar to 4931415M17
           protein protein.
          Length = 317

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = +2

Query: 122 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLS 256
           +PHY+PGY G  P+ +Y++G+TYG TT ++L DPSVQ S   VLS
Sbjct: 13  EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLS 57


>BC132916-1|AAI32917.1|  317|Homo sapiens similar to 4931415M17
           protein protein.
          Length = 317

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = +2

Query: 122 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLS 256
           +PHY+PGY G  P+ +Y++G+TYG TT ++L DPSVQ S   VLS
Sbjct: 13  EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLS 57


>AK097419-1|BAC05044.1|  271|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40100 fis, clone TESTI2004675. ).
          Length = 271

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = +2

Query: 122 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLS 256
           +PHY+PGY G  P+ +Y++G+TYG TT ++L DPSVQ S   VLS
Sbjct: 13  EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLS 57


>BC129999-1|AAI30000.1|  216|Homo sapiens LOC730112 protein protein.
          Length = 216

 Score = 53.2 bits (122), Expect = 7e-07
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = +2

Query: 125 PHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDP 223
           PHYIPGYTGHCP  ++ +G TYG  T ++L  P
Sbjct: 16  PHYIPGYTGHCPLLRFSVGQTYGQVTGQLLRGP 48



 Score = 29.9 bits (64), Expect = 7.5
 Identities = 20/68 (29%), Positives = 30/68 (44%)
 Frame = +1

Query: 289 PAQNEIDIVNARFRNGDPVYKHPMIPGYEGFSGHVPYGFQRFGESSKKLTNSALCDFSSN 468
           P   E+   +   R G       MIPGY GF   VP     F ++  ++   AL DF+  
Sbjct: 67  PRSPEVPRESLPVRRGQERLSSSMIPGYTGF---VPRAQFIFAKNCSQVWAEALSDFTHL 123

Query: 469 YRRRQSTE 492
           + ++ S E
Sbjct: 124 HEKQGSEE 131


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,477,001
Number of Sequences: 237096
Number of extensions: 2206388
Number of successful extensions: 4733
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4733
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)