Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0209
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 172 2e-43
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 172 2e-43
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 166 1e-41
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 140 1e-33
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 134 5e-32
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 134 5e-32
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 104 6e-23
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 1e-18
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 2e-18
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 89 3e-18
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 4e-18
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 88 4e-18
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 8e-18
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 87 8e-18
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 87 1e-17
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 87 1e-17
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 87 1e-17
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 87 1e-17
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 87 1e-17
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 5e-16
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 60 2e-09
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 58 5e-09
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 41 7e-04
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 36 0.019
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 34 0.076
SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2) 29 2.9
SB_20374| Best HMM Match : zf-U1 (HMM E-Value=1.7) 29 2.9
SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32) 28 5.0
SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08) 28 5.0
SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_50832| Best HMM Match : Homeobox (HMM E-Value=8.7e-23) 27 8.7
SB_40918| Best HMM Match : DMAP_binding (HMM E-Value=0.48) 27 8.7
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 172 bits (418), Expect = 2e-43
Identities = 78/88 (88%), Positives = 82/88 (93%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTL 180
TMSG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYRALTVPELT
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGG 264
QMFDAKNMM ACDPRHGRYLTVA + G
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAMFRG 319
Score = 163 bits (397), Expect = 7e-41
Identities = 71/85 (83%), Positives = 79/85 (92%)
Frame = +3
Query: 255 FRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPRGLKMASTFIGNTTAIQT 434
FRGRMSMKEVDEQ+ N+QNKNS+YFVEW PNN K AVCDIPPRGLKM++TFIGN+TAIQ
Sbjct: 317 FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQE 376
Query: 435 IFKRVSEQFVAMFRRKAFLHWYTGE 509
+FKR+SEQF AMFRRKAFLHWYTGE
Sbjct: 377 LFKRISEQFTAMFRRKAFLHWYTGE 401
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/39 (71%), Positives = 31/39 (79%), Gaps = 3/39 (7%)
Frame = +2
Query: 491 ALVHW*---GMDEMEFTEAEXNMXDLISEYPQYQDATAD 598
A +HW GMDEMEFTEAE NM DL+SEY QYQDATA+
Sbjct: 393 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAE 431
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 172 bits (418), Expect = 2e-43
Identities = 78/88 (88%), Positives = 82/88 (93%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTL 180
TMSG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYRALTVPELT
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGG 264
QMFDAKNMM ACDPRHGRYLTVA + G
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAMFRG 319
Score = 163 bits (397), Expect = 7e-41
Identities = 71/85 (83%), Positives = 79/85 (92%)
Frame = +3
Query: 255 FRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPRGLKMASTFIGNTTAIQT 434
FRGRMSMKEVDEQ+ N+QNKNS+YFVEW PNN K AVCDIPPRGLKM++TFIGN+TAIQ
Sbjct: 317 FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQE 376
Query: 435 IFKRVSEQFVAMFRRKAFLHWYTGE 509
+FKR+SEQF AMFRRKAFLHWYTGE
Sbjct: 377 LFKRISEQFTAMFRRKAFLHWYTGE 401
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/39 (71%), Positives = 31/39 (79%), Gaps = 3/39 (7%)
Frame = +2
Query: 491 ALVHW*---GMDEMEFTEAEXNMXDLISEYPQYQDATAD 598
A +HW GMDEMEFTEAE NM DL+SEY QYQDATA+
Sbjct: 393 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAE 431
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 166 bits (404), Expect = 1e-41
Identities = 78/95 (82%), Positives = 83/95 (87%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTL 180
TMSG+TTCLRFPGQLNADLRKLAVNMVPFPRL F+ PGFAPLTSRG+QQYRALTVPELT
Sbjct: 177 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLPFFMPGFAPLTSRGSQQYRALTVPELTQ 236
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGGECL*KKL 285
QMFDAKNMM ACDP HGRYLTVA + G K+L
Sbjct: 237 QMFDAKNMMAACDPLHGRYLTVAAMFRGRMSMKEL 271
Score = 162 bits (394), Expect = 2e-40
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +3
Query: 255 FRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPRGLKMASTFIGNTTAIQT 434
FRGRMSMKE+DEQ+ N+QNKNS+YFVEW PNN K AVCDIPPRGLKM++TFIGN+TAIQ
Sbjct: 262 FRGRMSMKELDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQE 321
Query: 435 IFKRVSEQFVAMFRRKAFLHWYTGE 509
+FKR+SEQF AMFRRKAFLHWYTGE
Sbjct: 322 LFKRISEQFTAMFRRKAFLHWYTGE 346
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/39 (71%), Positives = 31/39 (79%), Gaps = 3/39 (7%)
Frame = +2
Query: 491 ALVHW*---GMDEMEFTEAEXNMXDLISEYPQYQDATAD 598
A +HW GMDEMEFTEAE NM DL+SEY QYQDATA+
Sbjct: 338 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAE 376
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 140 bits (338), Expect = 1e-33
Identities = 61/88 (69%), Positives = 74/88 (84%)
Frame = +1
Query: 1 TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTL 180
TMSG+TTCLRFPGQLNADLRKLAVNM+P+PRLHF+ PGFAPLTSR YRALTV +LT
Sbjct: 137 TMSGLTTCLRFPGQLNADLRKLAVNMIPYPRLHFFMPGFAPLTSRECVSYRALTVADLTQ 196
Query: 181 QMFDAKNMMVACDPRHGRYLTVATISGG 264
+FD KN+++AC+P+ G+YLT A + G
Sbjct: 197 AIFDNKNLLIACNPKRGKYLTYAAMYRG 224
Score = 112 bits (269), Expect = 2e-25
Identities = 47/85 (55%), Positives = 66/85 (77%)
Frame = +3
Query: 255 FRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPRGLKMASTFIGNTTAIQT 434
+RG MSMKEV++Q+A Q++ S+ FV+W PNN K+AVCD+PP +KM+++ I + TAIQ
Sbjct: 222 YRGLMSMKEVEDQMAFAQDRYSSLFVDWIPNNGKVAVCDVPPHDMKMSASCISSNTAIQE 281
Query: 435 IFKRVSEQFVAMFRRKAFLHWYTGE 509
+FKR+ + MFRR+AFLHWYT E
Sbjct: 282 LFKRIRLHYKLMFRRRAFLHWYTEE 306
Score = 35.5 bits (78), Expect = 0.033
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +2
Query: 491 ALVHW*---GMDEMEFTEAEXNMXDLISEYPQYQDATAD 598
A +HW GMD +F EA+ ++ DLIS Y Q +D A+
Sbjct: 298 AFLHWYTEEGMDSQQFEEADNDILDLISTYQQCEDMKAE 336
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 134 bits (324), Expect = 5e-32
Identities = 58/76 (76%), Positives = 64/76 (84%)
Frame = +3
Query: 282 VDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTIFKRVSEQF 461
VDEQ+ N QNKNS +FVEW PNN K VCDI P+GLKMA+TF+GN TAIQ +FKRV EQF
Sbjct: 91 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQF 150
Query: 462 VAMFRRKAFLHWYTGE 509
AMFRRKAFLHWYTGE
Sbjct: 151 TAMFRRKAFLHWYTGE 166
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/39 (69%), Positives = 30/39 (76%), Gaps = 3/39 (7%)
Frame = +2
Query: 491 ALVHW*---GMDEMEFTEAEXNMXDLISEYPQYQDATAD 598
A +HW GMDEMEFTEAE NM DLI+EY QYQ+A AD
Sbjct: 158 AFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQEAEAD 196
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 134 bits (324), Expect = 5e-32
Identities = 58/76 (76%), Positives = 64/76 (84%)
Frame = +3
Query: 282 VDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTIFKRVSEQF 461
VDEQ+ N QNKNS +FVEW PNN K VCDI P+GLKMA+TF+GN TAIQ +FKRV EQF
Sbjct: 153 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQF 212
Query: 462 VAMFRRKAFLHWYTGE 509
AMFRRKAFLHWYTGE
Sbjct: 213 TAMFRRKAFLHWYTGE 228
Score = 105 bits (253), Expect = 2e-23
Identities = 47/64 (73%), Positives = 53/64 (82%)
Frame = +1
Query: 76 MVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQMFDAKNMMVACDPRHGRYLTVATI 255
MVPFPRLHF+ PGFAPL SR QQY+ ++V ELT QMFDA+NMM ACDPRHGRYLTVA I
Sbjct: 1 MVPFPRLHFFMPGFAPLASRANQQYQNVSVEELTQQMFDARNMMTACDPRHGRYLTVAAI 60
Query: 256 SGGE 267
G+
Sbjct: 61 FRGK 64
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/39 (69%), Positives = 30/39 (76%), Gaps = 3/39 (7%)
Frame = +2
Query: 491 ALVHW*---GMDEMEFTEAEXNMXDLISEYPQYQDATAD 598
A +HW GMDEMEFTEAE NM DLI+EY QYQ+A AD
Sbjct: 220 AFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQEAEAD 258
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 104 bits (249), Expect = 6e-23
Identities = 45/68 (66%), Positives = 55/68 (80%)
Frame = +3
Query: 306 QNKNSTYFVEWXPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTIFKRVSEQFVAMFRRKA 485
Q+ +S+ FVEW PNN K AVCD+PP GLK A+TF+ N+TAIQ F+R +EQF AMFRR+A
Sbjct: 153 QDSHSSSFVEWIPNNMKTAVCDVPPVGLKNAATFLYNSTAIQEAFRRFTEQFAAMFRRRA 212
Query: 486 FLHWYTGE 509
FLHWYT E
Sbjct: 213 FLHWYTTE 220
Score = 33.1 bits (72), Expect(2) = 0.006
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 527 FTEAEXNMXDLISEYPQYQDATAD 598
+ A+ N+ DLISEY QY+DA +D
Sbjct: 256 YFSADSNLNDLISEYQQYEDAKSD 279
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 1 TMSGITTCLRFPGQ 42
TMSG+TT LRFPGQ
Sbjct: 140 TMSGVTTSLRFPGQ 153
Score = 23.8 bits (49), Expect(2) = 0.006
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
Frame = +2
Query: 491 ALVHW*---GMDEMEFTEAEXN 547
A +HW GMD +EFTE + N
Sbjct: 212 AFLHWYTTEGMDPLEFTEIKRN 233
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/104 (39%), Positives = 59/104 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 606 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMASYAPVVSAEKAYHEQLTVADITNS 665
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + S +TK
Sbjct: 666 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTK 709
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPR--------GLKMAS 401
C +RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 687 CLLYRGDVVPKDVNSAIATIKTKKTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 746
Query: 402 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
+ NTTAI + R+ +F M+ ++AF+HWY GE
Sbjct: 747 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 782
Score = 61.7 bits (143), Expect = 4e-10
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 1039 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNA 1098
Query: 184 MFDAKNMM 207
F+ N M
Sbjct: 1099 CFEPANQM 1106
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Frame = +3
Query: 279 EVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPR--------GLKMASTFIGNTTAIQT 434
+V+ +A I+ K + FV+W P K+ + PP ++ A + NTTAI
Sbjct: 1107 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 1166
Query: 435 IFKRVSEQFVAMFRRKAFLHWYTGE 509
+ R+ +F M+ ++AF+HWY GE
Sbjct: 1167 AWARLDHKFDLMYAKRAFVHWYVGE 1191
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 89.4 bits (212), Expect = 2e-18
Identities = 41/104 (39%), Positives = 59/104 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 220 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITTS 279
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + + +TK
Sbjct: 280 CFEPANQMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTK 323
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/91 (36%), Positives = 51/91 (56%)
Frame = +1
Query: 43 LNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQMFDAKNMMVACDP 222
LN DL + N+VP+PR+HF +AP+ S + +TV +LT F+ N MV CDP
Sbjct: 664 LNVDLMEFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQMVKCDP 723
Query: 223 RHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
RHG+Y+ + G+ + K + + +TK
Sbjct: 724 RHGKYMACCLLFRGDVVPKDVNAAIATIKTK 754
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPR--------GLKMAS 401
C FRG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 301 CLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 360
Query: 402 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
+ NTTAI + R+ +F M+ ++AF+HWY GE
Sbjct: 361 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 396
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPR--------GLKMAS 401
C FRG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 732 CLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 791
Query: 402 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
+ NTTAI + R+ +F M+ ++AF+HWY GE
Sbjct: 792 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 827
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 89.0 bits (211), Expect = 3e-18
Identities = 41/104 (39%), Positives = 60/104 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 235 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA 294
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + S+ +TK
Sbjct: 295 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSSIATIKTK 338
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPR--------GLKMAS 401
C +RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 316 CLLYRGDVVPKDVNSSIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 375
Query: 402 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
+ NTTAI + R+ +F M+ ++AF+HWY GE
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 88.2 bits (209), Expect = 4e-18
Identities = 41/104 (39%), Positives = 59/104 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 235 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNA 294
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + + +TK
Sbjct: 295 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 338
Score = 61.7 bits (143), Expect = 4e-10
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPR--------GLKMAS 401
C +RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 316 CLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 375
Query: 402 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
+ NTTAI + R+ +F M+ ++AF+HWY GE
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 88.2 bits (209), Expect = 4e-18
Identities = 41/104 (39%), Positives = 59/104 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 668 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNA 727
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + + +TK
Sbjct: 728 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 771
Score = 86.6 bits (205), Expect = 1e-17
Identities = 40/104 (38%), Positives = 59/104 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 235 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA 294
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + + +TK
Sbjct: 295 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 338
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPR--------GLKMAS 401
C +RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 316 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 375
Query: 402 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
+ NTTA+ + R+ +F M+ ++AF+HWY GE
Sbjct: 376 CMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGE 411
Score = 61.7 bits (143), Expect = 4e-10
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPR--------GLKMAS 401
C +RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 749 CLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 808
Query: 402 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
+ NTTAI + R+ +F M+ ++AF+HWY GE
Sbjct: 809 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 844
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 87.4 bits (207), Expect = 8e-18
Identities = 40/104 (38%), Positives = 59/104 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + +TV +LT
Sbjct: 200 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNA 259
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + + +TK
Sbjct: 260 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 303
Score = 61.7 bits (143), Expect = 4e-10
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPR--------GLKMAS 401
C +RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 281 CLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 340
Query: 402 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
+ NTTAI + R+ +F M+ ++AF+HWY GE
Sbjct: 341 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 376
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 87.4 bits (207), Expect = 8e-18
Identities = 41/104 (39%), Positives = 58/104 (55%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 160 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNS 219
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + + R K
Sbjct: 220 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIRPK 263
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/88 (28%), Positives = 43/88 (48%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPRGLKMASTFIGNTTA 425
C +RG + K+V+ +A I+ K + F +W P K+ + PP +
Sbjct: 241 CLLYRGDVVPKDVNAAIATIRPKRTFQFGDWCPTGFKVGINSQPPTVVPGGDL----AKP 296
Query: 426 IQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
I + R+ +F M+ ++AF+HWY GE
Sbjct: 297 IAEAWARLDHKFDLMYAKRAFVHWYVGE 324
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/104 (38%), Positives = 59/104 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 33 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNA 92
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + + +TK
Sbjct: 93 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 136
Score = 58.4 bits (135), Expect = 4e-09
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPRGL--------KMAS 401
C +RG + K+V+ +A I+ K + FV+W P K+ + P + + +
Sbjct: 114 CLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQQPTAVPGGDLAKVQRSV 173
Query: 402 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
+ NTTAI + R++ +F M+ ++AF+HWY GE
Sbjct: 174 CMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGE 209
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/104 (38%), Positives = 59/104 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 234 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNA 293
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + + +TK
Sbjct: 294 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 337
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPRGLKMASTF 407
C +RG + K+V+ +A I+ K + FV+W P K+ + P A+ +
Sbjct: 315 CLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIRHKAPGHFSWATVY 368
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 86.6 bits (205), Expect = 1e-17
Identities = 40/104 (38%), Positives = 59/104 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 172 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA 231
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + + +TK
Sbjct: 232 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 275
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPR--------GLKMAS 401
C +RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 253 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 312
Query: 402 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
+ NTTAI + R+ +F M+ ++AF+HWY GE
Sbjct: 313 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 348
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 86.6 bits (205), Expect = 1e-17
Identities = 40/104 (38%), Positives = 59/104 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 299 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA 358
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + + +TK
Sbjct: 359 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 402
Score = 86.6 bits (205), Expect = 1e-17
Identities = 40/104 (38%), Positives = 59/104 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 820 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA 879
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + + +TK
Sbjct: 880 CFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 923
Score = 61.7 bits (143), Expect = 4e-10
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPR--------GLKMAS 401
C +RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 901 CLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 960
Query: 402 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
+ NTTAI + R+ +F M+ ++AF+HWY GE
Sbjct: 961 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 996
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPP 380
C +RG + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 380 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 424
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 86.6 bits (205), Expect = 1e-17
Identities = 40/104 (38%), Positives = 59/104 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 160 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA 219
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + + +TK
Sbjct: 220 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 263
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPR--------GLKMAS 401
C +RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 241 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 300
Query: 402 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
+ NTTAI + R+ +F M+ ++AF+HWY GE
Sbjct: 301 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 336
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 86.6 bits (205), Expect = 1e-17
Identities = 40/104 (38%), Positives = 59/104 (56%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 33 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA 92
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTSNWRIFRTK 315
F+ N MV CDPRHG+Y+ + G+ + K + + +TK
Sbjct: 93 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 136
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPR--------GLKMAS 401
C +RG + K+V+ +A I+ K + FV+W P K+ + PP ++ A
Sbjct: 114 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 173
Query: 402 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
+ NTTAI + R+ +F M+ ++AF+HWY GE
Sbjct: 174 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 209
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 86.2 bits (204), Expect = 2e-17
Identities = 38/88 (43%), Positives = 53/88 (60%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S IT+ LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 1146 VSSITSSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISPEKAYHEQLTVAQITNM 1205
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGE 267
FD N MV CDPRHG+Y+ + G+
Sbjct: 1206 CFDPNNQMVKCDPRHGKYMACCMLYRGD 1233
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 81.4 bits (192), Expect = 5e-16
Identities = 35/96 (36%), Positives = 55/96 (57%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQ 183
+S +T LRF G LN DL + N+VP+PR+HF +AP+ + ++V E+T
Sbjct: 366 VSSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVIGADKAYHENMSVAEITSA 425
Query: 184 MFDAKNMMVACDPRHGRYLTVATISGGECL*KKLTS 291
F+ N MV CDPR+G+Y+ + G+ + K + S
Sbjct: 426 CFEPSNQMVKCDPRYGKYMACCLLYRGDVVPKDVNS 461
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 387 LKMASTFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
++ A + NTTAI + R+ +F M+ ++AF+HWY GE
Sbjct: 523 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 563
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 246 CDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPRGLKMASTFIGNT 419
C +RG + K+V+ +A I+ K + FV+W P K +I + K TF T
Sbjct: 447 CLLYRGDVVPKDVNSAIAAIKMKRTIQFVDWCPTGFKCHP-NISDKQKKSTKTFYSGT 503
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Frame = +3
Query: 261 GRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIAVCDIPPR--------GLKMASTFIGN 416
G + +K+V+ +A I+ K + FV+W P K+ + PP ++ A + N
Sbjct: 305 GDVVLKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 364
Query: 417 TTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
TTAI + R+ +F M+ ++AF+HWY GE
Sbjct: 365 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 395
Score = 57.2 bits (132), Expect = 9e-09
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELT 177
+S +T LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 225 VSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEIT 282
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = +1
Query: 13 ITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQMFD 192
+T+ RF G LN DL ++ +N+VPFP+LH+ PL + + + ++ F
Sbjct: 285 MTSSARFEGSLNVDLNEITMNLVPFPKLHYLVSSQTPLYALTDVKLPPRRLDQMFTDAFS 344
Query: 193 AKNMMVACDPRHGRYLTVATISGG 264
+ ++ DP+H YL A I G
Sbjct: 345 KDHQLIKADPKHNLYLACALILRG 368
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 279 EVDEQLANIQN-KNSTYFVEWXPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTIFKRVSE 455
EV + NI+ K S F+ W K +C +PP G + + N + I+ F + +
Sbjct: 371 EVSDIRRNIERLKPSLKFIHWNQEGWKTGLCSVPPVGQPYSLLTLANNSCIKNTFVELKD 430
Query: 456 QFVAMFRRKAFLHWYT 503
+F+ +++RKA +H YT
Sbjct: 431 RFMKLYKRKAHVHHYT 446
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTS 132
M+ TT LR+PG +N DL L +++P PRLHF G+ PLT+
Sbjct: 272 MATSTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTT 314
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 408 IGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGE 509
+ NTTAI + R++ +F M+ ++AF+HWY GE
Sbjct: 76 LSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGE 109
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 4 MSGITTCLRFPGQLNADLRKLAVNMVPFP 90
+S IT LRF G LN DL + N+VP+P
Sbjct: 110 VSSITASLRFDGALNVDLTEFQTNLVPYP 138
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 1 TMSGITTCLRFPGQ 42
TMSG+TTCLRFPGQ
Sbjct: 445 TMSGVTTCLRFPGQ 458
>SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2)
Length = 341
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 106 TPGFAPLTSRGAQQYRALTVPELTLQMFDAKNM--MVACDPRHGRYLTVA 249
+PG+ L++ G+ Q T P +T +M+ K +A P R+ T+A
Sbjct: 117 SPGYLSLSAFGSPQVSRSTTPGITYEMYGVKERGNSLAARPATSRHATLA 166
>SB_20374| Best HMM Match : zf-U1 (HMM E-Value=1.7)
Length = 783
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 437 YGLYGRRVTNEGRSHFKTPRRYVTHGNLA 351
Y L GR +GRSH +TP+ YV NL+
Sbjct: 74 YLLSGRGKHGKGRSHRQTPQEYVDTHNLS 102
>SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32)
Length = 458
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 201 HDGRV*SSTREVFDRCDDFRGRMSMKEVDEQLANIQNKNSTYFVEWXPNNCKIA-VCD 371
HDGR+ +S E D ++M E E++ +Q T+ V W PN +A CD
Sbjct: 285 HDGRMLASGSE------DLIIDIAMVETGERICEVQCHAPTFTVAWHPNKPLLAFACD 336
>SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08)
Length = 910
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 311 VLNIRQLLVNFFHRHSPPEIVATVKYLPC 225
VLNIRQ +++ R P E++ +K PC
Sbjct: 727 VLNIRQKVISIQERPDPAELMYRLKDYPC 755
>SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1490
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = -3
Query: 539 LPX*TPFHPYLTSVPVQEGFP-----PKHSHELLRHPLEYGLYGRRVTNEGRSHFKTPRR 375
LP P +PY ++PV G+P P + + +P +G++ R + G + P
Sbjct: 862 LPPQFPQYPYPAAMPVPYGYPMIPMIPPAMYPPMAYPAHHGMFPFRPIHPG---YGLPMP 918
Query: 374 YVTH 363
Y+ H
Sbjct: 919 YMMH 922
>SB_50832| Best HMM Match : Homeobox (HMM E-Value=8.7e-23)
Length = 285
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = -3
Query: 515 PYLTSVPVQEGFPPKHSHELLRHPLEYGLYGRRVTNEGRSHFKT----PRRYVTHGNLAV 348
PY++ VP+ G P + R P+ +G RS + T R + HG+L V
Sbjct: 112 PYMSRVPICHGSPYVRGPYMSRVPICHGSLYVTGPYMSRSLYVTRLYMSRVTICHGSLYV 171
Query: 347 IGXPL 333
G PL
Sbjct: 172 AGFPL 176
>SB_40918| Best HMM Match : DMAP_binding (HMM E-Value=0.48)
Length = 366
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 199 NMMVACDPRHGRYLTVATISG 261
++ ++CDPRHG A++SG
Sbjct: 156 SVKISCDPRHGETYRQASVSG 176
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,033,495
Number of Sequences: 59808
Number of extensions: 420047
Number of successful extensions: 1282
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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