Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0207
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 146 9e-36
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 141 3e-34
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 129 1e-30
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 120 9e-28
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 1e-24
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 72 3e-13
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 56 1e-08
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 5e-07
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 30 0.92
SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 27 6.5
SB_8091| Best HMM Match : C1_4 (HMM E-Value=1.3) 27 8.6
SB_52274| Best HMM Match : FtsJ (HMM E-Value=0) 27 8.6
SB_43858| Best HMM Match : TPR_2 (HMM E-Value=0.0013) 27 8.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 146 bits (354), Expect = 9e-36
Identities = 70/81 (86%), Positives = 73/81 (90%)
Frame = +3
Query: 255 AGGVMTTLIKRNTTIPTKQTQXFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIP 434
AGGVM+ LIKRN+TIPTKQTQ FTTYSDNQPGVLIQVFEGER+MT NNLLGKFELTGIP
Sbjct: 408 AGGVMSVLIKRNSTIPTKQTQTFTTYSDNQPGVLIQVFEGERSMTAHNNLLGKFELTGIP 467
Query: 435 XAPRGVPQIXVTFXIXANGIL 497
APRGVPQI VTF I ANGIL
Sbjct: 468 PAPRGVPQIEVTFDIDANGIL 488
Score = 94.3 bits (224), Expect = 5e-20
Identities = 48/87 (55%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 LRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXX 174
+RD+K+ K IHDIVLVGGSTRIPK+QK+LQ+ F GKELNKSINPDE
Sbjct: 321 IRDSKIPGGKESIHDIVLVGGSTRIPKIQKMLQELFGGKELNKSINPDEAVAYGAAVQAA 380
Query: 175 ILHGDKSEXVQDXXXXXXXXXXXGIET 255
ILHGDK + V+D GIET
Sbjct: 381 ILHGDKDDTVKDLLLLDVAPLSMGIET 407
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 141 bits (342), Expect = 3e-34
Identities = 66/81 (81%), Positives = 72/81 (88%)
Frame = +3
Query: 255 AGGVMTTLIKRNTTIPTKQTQXFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIP 434
AGGVMT IKRNTTIPTKQTQ FTTYSDNQ VLIQV+EGER++TKDNNLLGKFEL+GIP
Sbjct: 500 AGGVMTAAIKRNTTIPTKQTQTFTTYSDNQTSVLIQVYEGERSLTKDNNLLGKFELSGIP 559
Query: 435 XAPRGVPQIXVTFXIXANGIL 497
APRGVPQI VTF + +NGIL
Sbjct: 560 PAPRGVPQIDVTFDVDSNGIL 580
Score = 95.1 bits (226), Expect = 3e-20
Identities = 47/86 (54%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 LRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXI 177
++D+K++ K +I +IV+VGGSTRIPK+Q LLQ+FFNGKELNKSINPDE I
Sbjct: 414 IKDSKLESKEKIDEIVMVGGSTRIPKIQSLLQNFFNGKELNKSINPDEAVAYGAAVQAAI 473
Query: 178 LHGDKSEXVQDXXXXXXXXXXXGIET 255
LHGDKSE QD G+ET
Sbjct: 474 LHGDKSEATQDLLLLDVAPLTLGLET 499
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 129 bits (311), Expect = 1e-30
Identities = 62/81 (76%), Positives = 67/81 (82%)
Frame = +3
Query: 255 AGGVMTTLIKRNTTIPTKQTQXFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIP 434
AG VMT LI+RN IPTK TQ FTTYSDNQP V I+VFEGER +TK NNLLGKF+L+GIP
Sbjct: 407 AGEVMTKLIERNARIPTKATQTFTTYSDNQPAVTIRVFEGERPLTKHNNLLGKFDLSGIP 466
Query: 435 XAPRGVPQIXVTFXIXANGIL 497
APRGVPQI VTF I ANGIL
Sbjct: 467 PAPRGVPQIEVTFDIDANGIL 487
Score = 93.9 bits (223), Expect = 7e-20
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +1
Query: 1 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL 180
L DAK K+ IH++VLVGGSTR+PK+QK+L+++F+GK LNKSINPDE IL
Sbjct: 322 LSDAKFSKSDIHEVVLVGGSTRVPKIQKMLEEYFSGKSLNKSINPDEAVAYGAAVQAAIL 381
Query: 181 HGDKSEXVQDXXXXXXXXXXXGIET 255
GDKS+ V+D GIET
Sbjct: 382 SGDKSDEVKDVLLVDVAPLSLGIET 406
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 120 bits (288), Expect = 9e-28
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +3
Query: 258 GGVMTTLIKRNTTIPTKQTQXFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPX 437
GGVMT LI RNT IPTK++Q F+T +DNQ V IQVFEGER MTKDN+ LGKF+L GIP
Sbjct: 1102 GGVMTKLISRNTVIPTKKSQVFSTAADNQNTVTIQVFEGERPMTKDNHPLGKFDLNGIPP 1161
Query: 438 APRGVPQIXVTFXIXANGIL 497
APRGVPQI VTF I NGIL
Sbjct: 1162 APRGVPQIEVTFEIDVNGIL 1181
Score = 74.5 bits (175), Expect = 4e-14
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = +1
Query: 1 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL 180
L DA + K++IH+IVLVGGSTRIPKVQ+L++DFF GKE ++ INPDE +L
Sbjct: 1018 LEDADLKKSEIHEIVLVGGSTRIPKVQQLVKDFFEGKEPSRGINPDEAVAYGAAVQAGVL 1077
Query: 181 HGDK 192
G++
Sbjct: 1078 GGEE 1081
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 109 bits (262), Expect = 1e-24
Identities = 52/80 (65%), Positives = 62/80 (77%)
Frame = +3
Query: 258 GGVMTTLIKRNTTIPTKQTQXFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPX 437
GGV T LI RNTTIPTK++Q F+T +D Q V I+VF+GER M DN LLG+F+L GIP
Sbjct: 213 GGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAIDNKLLGQFQLVGIPP 272
Query: 438 APRGVPQIXVTFXIXANGIL 497
APRGVPQ+ VTF I ANGI+
Sbjct: 273 APRGVPQVEVTFDIDANGIV 292
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/86 (40%), Positives = 51/86 (59%)
Frame = +1
Query: 1 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL 180
L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE +L
Sbjct: 132 LQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIGAAIQGGVL 190
Query: 181 HGDKSEXVQDXXXXXXXXXXXGIETL 258
GD V+D GIETL
Sbjct: 191 AGD----VKDVLLLDVTPLSLGIETL 212
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 71.7 bits (168), Expect = 3e-13
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +3
Query: 258 GGVMTTLIKRNTTIPTKQTQXFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL 422
GGV T LI RNTTIPTK++Q F+T +D Q V I+VF+GER M DN LLG+F+L
Sbjct: 158 GGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAIDNKLLGQFQL 212
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/86 (40%), Positives = 51/86 (59%)
Frame = +1
Query: 1 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL 180
L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE +L
Sbjct: 77 LQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIGAAIQGGVL 135
Query: 181 HGDKSEXVQDXXXXXXXXXXXGIETL 258
GD V+D GIETL
Sbjct: 136 AGD----VKDVLLLDVTPLSLGIETL 157
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 56.4 bits (130), Expect = 1e-08
Identities = 21/46 (45%), Positives = 38/46 (82%)
Frame = +1
Query: 1 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 138
L + ++ K ++ ++VLVGGSTR+PK+++L+Q+FF+GK N +I+P+
Sbjct: 354 LAEVELPKEEVDEVVLVGGSTRVPKIRQLIQEFFDGKPPNVAIDPE 399
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = +1
Query: 16 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK 192
+ ++ + ++LVGG+TR PK+Q+LL+++F GKE+ + I+PDE IL G K
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRK 93
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = +1
Query: 1 LRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 141
L+ A M I +VLVGG R+PKVQ L EL K+IN DE
Sbjct: 305 LKSASMTMNDIDSVVLVGGGIRVPKVQDALLRAVKKPELAKNINADE 351
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +1
Query: 28 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 141
+I + +VGGSTRIP ++ ++++ F GKEL ++N DE
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 30.3 bits (65), Expect = 0.92
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 246 TEGKGCYIKQQQILHXLRLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEIL 91
T G I+QQQ LRLVT Q + ++ + L ++ FV LL K ++
Sbjct: 9 TAGAAVAIEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAKYLI 60
>SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 957
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -2
Query: 249 NTEGKGCYIKQQQILHXL--RLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEILQELLH 76
+ EG G ++Q ++ L ++ VQ +S D C +YG+V + L S +E L+ LH
Sbjct: 463 HVEGAGFRERKQVLVTSLLSAILAVQVASFD-CAKNYGVVSWLNCLALQSGRESLETTLH 521
Query: 75 LGDTSGATHQ 46
L T T Q
Sbjct: 522 LLQTMWETMQ 531
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 292 LPSPLNRLXHSPPTLITNP 348
LP N + H+PPT + NP
Sbjct: 760 LPDTANEIEHAPPTTVINP 778
>SB_8091| Best HMM Match : C1_4 (HMM E-Value=1.3)
Length = 308
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 36 RYCTGGWLHSYPQGAEAPARFL 101
RYC G LH PQ + PA L
Sbjct: 204 RYCIKGPLHRLPQAVQEPATIL 225
>SB_52274| Best HMM Match : FtsJ (HMM E-Value=0)
Length = 316
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +1
Query: 349 EYSSKYLRVSVL*PKITTCSVNSS*PGSXRRRVACLKLXSPSXSXPTVSS 498
+ S Y ++ V P +T C SS S V C P PT+S+
Sbjct: 168 DVSLLYAQLKVFFPTVTICKPRSSRNSSIESFVVCQGYAPPQGYKPTMSN 217
>SB_43858| Best HMM Match : TPR_2 (HMM E-Value=0.0013)
Length = 517
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 137 SGLIDLLSSFPLKKSCRSFC 78
SG IDLLSSFP+ + R C
Sbjct: 162 SGSIDLLSSFPVLVTLRPLC 181
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,179,487
Number of Sequences: 59808
Number of extensions: 293341
Number of successful extensions: 700
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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