Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0207
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   1.8  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   2.3  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   3.1  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 331 TLITNPEYSSKYLR 372
           T I N  YSSKY+R
Sbjct: 199 TYIVNTNYSSKYMR 212


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +1

Query: 34  HDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 141
           +D ++VGG      V   L +  N K L     PDE
Sbjct: 69  YDFIVVGGGAARAVVAGRLSEVSNWKVLLLEAGPDE 104


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -3

Query: 356 EYSGLVIRVGGEXLSLFSGDGSVTLDECGHDTSSVSIPRERG 231
           E+ G+   +G   ++L SG+    LD  GH  + +S+ R RG
Sbjct: 174 EFGGITQCIGAFDVTLESGERVTFLDTPGH-AAFISM-RHRG 213


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,749
Number of Sequences: 438
Number of extensions: 2338
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)