Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0206
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0605 + 4497308-4497472,4497719-4497904,4498898-4499003,449... 45 4e-05
05_01_0562 + 4907937-4907990,4908890-4909075,4909180-4909285,490... 45 5e-05
02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217 45 5e-05
09_06_0203 + 21555747-21555805,21555862-21555939,21556034-215560... 44 1e-04
01_06_0175 + 27229878-27230056,27231102-27231159,27231230-272312... 43 2e-04
08_01_0008 - 65366-65497,65588-65759,65846-65972,66058-66140,662... 43 2e-04
02_05_0261 + 27243898-27243938,27244068-27244157,27244293-272443... 40 0.001
04_04_0814 + 28266590-28266615,28266780-28266860,28266986-282670... 40 0.002
07_03_0358 - 17177253-17177369,17177635-17177931,17178961-171790... 30 1.2
09_02_0569 - 10752756-10753164,10753229-10753644,10754149-107553... 29 2.1
11_04_0244 - 15283425-15283448,15283509-15283760 29 2.8
07_01_0039 - 306384-306551,306645-306749,306845-306949,307030-30... 29 2.8
04_04_1249 - 32067644-32067787,32068245-32068346,32068415-320684... 29 3.7
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 28 4.9
02_03_0387 - 18412064-18412144,18412280-18412361,18412922-184131... 28 4.9
12_02_0842 - 23588826-23589198,23589548-23590203 27 8.6
09_04_0176 + 15361766-15362836 27 8.6
07_01_0710 - 5355277-5355666 27 8.6
05_06_0022 + 24988363-24988453,24989102-24989325,24989433-249894... 27 8.6
>01_01_0605 +
4497308-4497472,4497719-4497904,4498898-4499003,
4499062-4499216,4499341-4499424,4499498-4499589,
4499729-4499837,4499944-4500030,4500153-4500245,
4501144-4501341,4501481-4501632,4501724-4501874,
4501975-4502073,4502159-4502326,4502624-4502702,
4502870-4503000
Length = 684
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +3
Query: 90 DVNAPKRPATAFMLWLNENRKKIIEENPGIKVTEVAKRAGELWRDL 227
D NAPKR T FM + R + NP + TE+AK+ GE+W+ +
Sbjct: 595 DPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMWQKM 640
>05_01_0562 +
4907937-4907990,4908890-4909075,4909180-4909285,
4909377-4909513,4909989-4910072,4910157-4910248,
4910358-4910466,4910554-4910640,4910737-4910829,
4911384-4911581,4911659-4911810,4911910-4912060,
4912174-4912272,4912362-4912535,4912680-4912758,
4912858-4912979
Length = 640
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 90 DVNAPKRPATAFMLWLNENRKKIIEENPGIKVTEVAKRAGELWRDL--KDKSEWEEKPTK 263
D NAPKR FM + R + NP + TE+AK+ GE W+ + ++K + E+
Sbjct: 554 DPNAPKRAIAPFMYFSKAERANLKNSNPELATTEIAKKLGERWQKMTAEEKQPYVEQSQV 613
Query: 264 RKKNTMPQ*RSIKTAA 311
KK + + + AA
Sbjct: 614 DKKRYAEESAAYRGAA 629
>02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217
Length = 504
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +3
Query: 90 DVNAPKRPATAFMLWLNENRKKIIEENPGIKVTEVAKRAGELWRDL--KDKSEWEEK 254
D N PK+PA++F+L+ E R+++ EE PG+ + + W++L +K W K
Sbjct: 410 DPNRPKKPASSFLLFSKEARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAWNGK 466
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +3
Query: 105 KRPATAFMLWLNENRKKIIEENPGIKVTEVAKRAGELWRDL--KDKSEWEEKPTKRKK 272
K+P A++LW + +I +E+P EV+ G W+ L ++K +EE+ + K+
Sbjct: 158 KKPCPAYVLWCKDQWNEIKKESPDADFKEVSNALGAKWKALGAEEKQPYEERYRQEKE 215
>09_06_0203 +
21555747-21555805,21555862-21555939,21556034-21556091,
21556191-21556235,21556514-21556549,21556855-21556935,
21557016-21557087,21557184-21557195
Length = 146
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 90 DVNAPKRPATAFMLWLNENRKKIIEENPGIK-VTEVAKRAGELWRDLKD 233
D N PKRP +AF +++ + RK E++P +K V+ + K G+ W+ + D
Sbjct: 31 DPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTD 79
>01_06_0175 +
27229878-27230056,27231102-27231159,27231230-27231274,
27232711-27232791,27232884-27232922
Length = 133
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 90 DVNAPKRPATAFMLWLNENRKKIIEENPGIK-VTEVAKRAGELWRDL 227
D PK+P TAF ++ + RK EENP +K + EV K GE W +
Sbjct: 45 DRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTM 91
>08_01_0008 -
65366-65497,65588-65759,65846-65972,66058-66140,
66232-66329
Length = 203
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +3
Query: 105 KRPATAFMLWLNENRKKIIEENPGIK-VTEVAKRAGELWRDLKDKSE 242
KRP TAF L++++ RK+ E+P K V+ VAK GE W+ + D+ +
Sbjct: 93 KRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDK 139
>02_05_0261 +
27243898-27243938,27244068-27244157,27244293-27244350,
27244441-27244485,27244778-27244855,27244940-27245041,
27245150-27245173
Length = 145
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/61 (34%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Frame = +3
Query: 102 PKRPATAFMLWLNENRKKIIEENPGIK-VTEVAKRAGELWRDL--KDKSEWEEKPTKRKK 272
PKRP +AF ++++E R++ +P K V V+K AGE WR + ++K+ + +K ++K+
Sbjct: 33 PKRPPSAFFVFMSEFRQEYQAAHPDNKSVAAVSKAAGEKWRAMSEQEKAPYVDKAGQKKQ 92
Query: 273 N 275
+
Sbjct: 93 D 93
>04_04_0814 +
28266590-28266615,28266780-28266860,28266986-28267043,
28267143-28267187,28268653-28268721,28268821-28268931,
28269038-28269046
Length = 132
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 102 PKRPATAFMLWLNENRKKIIEENPGIK-VTEVAKRAGELWRDLKDKSE 242
PKR T F +L E R + +E++P K V V K AGE WR + D+ +
Sbjct: 25 PKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSDEEK 72
>07_03_0358 - 17177253-17177369,17177635-17177931,17178961-17179032,
17179117-17179383,17179752-17179910,17180194-17180295,
17180696-17180767,17181105-17181200,17181710-17181871,
17181941-17182021,17182837-17183094,17183173-17183275,
17183412-17183542,17184827-17184919,17184999-17185099,
17186271-17186355,17186487-17186701,17186779-17186842,
17187128-17187214,17188922-17189022,17190206-17190397,
17190533-17190599,17191211-17191351
Length = 1020
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 142 KTERKSLKRTPGSRSQRSPSARENSGGT*KTNRNGKRNQQSERR 273
K + K+ TPG R RS E GG + + G+R + + +
Sbjct: 883 KEQWKTSSNTPGKRKDRSKHEDEEGGGEKRRKKGGRRRKDQKTK 926
>09_02_0569 -
10752756-10753164,10753229-10753644,10754149-10755349,
10756770-10756991,10757615-10757767,10757883-10758034,
10758142-10758222,10758353-10758598,10759394-10759516
Length = 1000
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 271 FFRFVGFSSHSDLSFRSLQSSPAR 200
FF F + +H DLS+ +QS P R
Sbjct: 718 FFAFASYGTHLDLSYTPIQSLPVR 741
>11_04_0244 - 15283425-15283448,15283509-15283760
Length = 91
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 133 GSTKTERKSLKRTPGSRSQRSPSARENSGGT*KTNRNGKRNQQSERRIQC 282
GST T + T G RS S + R +GG+ +NR +R ++ R+ C
Sbjct: 36 GSTATT--TTVATCGLRSSGSATGRLQNGGSTASNRGSERAEERTLRLHC 83
>07_01_0039 -
306384-306551,306645-306749,306845-306949,307030-307111,
307457-307656,307754-307915,308043-308152,308255-308594,
308675-308749,308823-309032,309140-309343,309443-309562,
309643-309752,309832-309976,310716-310943
Length = 787
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 233 QIGMGRETNKAKEEYNAAMKKYKDSGAAD 319
QI M ++TNK +EYN ++++Y + AD
Sbjct: 201 QIKMLQDTNKRLQEYNTSLQQYNSNLQAD 229
>04_04_1249 -
32067644-32067787,32068245-32068346,32068415-32068438,
32068439-32068543,32068625-32068729,32068885-32068966,
32069254-32069456,32069534-32069692,32070045-32070154,
32070264-32070405,32070544-32070690,32070773-32070847,
32070923-32071132,32071223-32071426,32071514-32071633,
32071743-32071852,32072033-32072177,32072266-32072499,
32072611-32072646
Length = 818
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 233 QIGMGRETNKAKEEYNAAMKKYKDSGAAD 319
Q+ M ++TNK +EYN ++++Y + AD
Sbjct: 215 QLKMVQDTNKRLQEYNTSLQQYNSNLQAD 243
>05_01_0148 -
985745-986180,986290-986385,986498-986694,986824-986919,
987020-987059,987751-987857
Length = 323
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/68 (27%), Positives = 26/68 (38%)
Frame = +1
Query: 67 RSLRNARRT*TRQSGRRPPSCCGSTKTERKSLKRTPGSRSQRSPSARENSGGT*KTNRNG 246
R+ R R+ + R P E+K GSRS RSP + + RNG
Sbjct: 191 RARRELERSRSLSYSRSPRRSISPAANEKKRSPTPDGSRSPRSPQDQVSPPPKDNAERNG 250
Query: 247 KRNQQSER 270
+ S R
Sbjct: 251 SDHGDSPR 258
>02_03_0387 -
18412064-18412144,18412280-18412361,18412922-18413142,
18413387-18413745,18413834-18414443,18414546-18414605,
18414685-18414751,18414843-18414936,18415012-18415125,
18415242-18415308,18415386-18415551,18416587-18417080
Length = 804
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 104 KAAGDRLHAVAQRKQK-ENH*REPRDQGHRGRQARGRTLEG-PERQIGMGRETNKAKEE 274
++A DR + K++ E H RE +D GR+ R R E E+ RE K KE+
Sbjct: 5 RSASDRHRDKEKEKERRETHRREEKDHHGSGRRDRDRDRESYREKDKDDRREKEKEKEK 63
>12_02_0842 - 23588826-23589198,23589548-23590203
Length = 342
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 150 KKIIEENPGIKVTEVAKRAGELWRDLKDKSEWEEKPTKRKKNTMP 284
KKI E PG AKR G+ W K+K + E + R++ P
Sbjct: 87 KKIAAEVPG----RTAKRLGKWWEVFKEKQQRELRDRDRRRLPPP 127
>09_04_0176 + 15361766-15362836
Length = 356
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Frame = +3
Query: 213 LWRDLKDKSEWE---EKPTKRKKNTMPQ 287
+W+DLKD+ +W E+ +K K+N + +
Sbjct: 276 MWKDLKDQPKWRRVLEQSSKNKRNKISE 303
>07_01_0710 - 5355277-5355666
Length = 129
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 176 DQGHRGRQARGRTLEGPERQIGMGRETNKAKEEYNAAMKKYKDSGAAD 319
++G R R+ RGR GP G RE A ++ + GA D
Sbjct: 74 ERGGRSRRRRGRVARGPLAPAGESRERTSAANSGEGRRRRVAE-GARD 120
>05_06_0022 +
24988363-24988453,24989102-24989325,24989433-24989494,
24990219-24990440,24990740-24990869,24991373-24991698,
24991910-24992051,24992169-24992414
Length = 480
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 174 GIKVTEVAKRAGELWRDLKDKSEWEEKPTKRKK 272
G KVTE E W ++D S EE T+ +K
Sbjct: 298 GYKVTEDGSITEEYWEPVEDSSTDEEGETRNRK 330
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,781,835
Number of Sequences: 37544
Number of extensions: 200772
Number of successful extensions: 792
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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