Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0205
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11710.1 68416.m01435 lysyl-tRNA synthetase, putative / lysin... 160 6e-40
At3g13490.1 68416.m01697 tRNA synthetase class II (D, K and N) f... 113 8e-26
At4g33760.1 68417.m04793 tRNA synthetase class II (D, K and N) f... 57 8e-09
At4g26870.1 68417.m03867 aspartyl-tRNA synthetase, putative / as... 43 2e-04
At4g31180.2 68417.m04427 aspartyl-tRNA synthetase, putative / as... 31 0.44
At4g31180.1 68417.m04426 aspartyl-tRNA synthetase, putative / as... 31 0.44
At5g15710.1 68418.m01837 F-box family protein unusual floral org... 30 1.3
At4g13830.2 68417.m02143 DNAJ heat shock N-terminal domain-conta... 29 3.1
At4g13830.1 68417.m02142 DNAJ heat shock N-terminal domain-conta... 29 3.1
At4g12040.2 68417.m01916 zinc finger (AN1-like) family protein c... 28 4.1
At4g12040.1 68417.m01915 zinc finger (AN1-like) family protein c... 28 4.1
At5g53510.1 68418.m06650 oligopeptide transporter OPT family pro... 27 7.2
At5g19290.1 68418.m02299 esterase/lipase/thioesterase family pro... 27 7.2
At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family... 27 9.5
At1g02205.2 68414.m00154 CER1 protein identical to maize gl1 hom... 27 9.5
At1g02205.1 68414.m00153 CER1 protein identical to maize gl1 hom... 27 9.5
>At3g11710.1 68416.m01435 lysyl-tRNA synthetase, putative /
lysine--tRNA ligase, putative similar to SP|Q43776
Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)
{Lycopersicon esculentum}; contains Pfam profile
PF00152: tRNA synthetases class II (D, K and N)
Length = 626
Score = 160 bits (389), Expect = 6e-40
Identities = 69/86 (80%), Positives = 79/86 (91%)
Frame = +1
Query: 1 RRFLDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDR 180
RRFLDN FLEVETP+MNM+ GGA A+PF+THHN+L+M LYMRIAPELY K L+VGGL+R
Sbjct: 291 RRFLDNKNFLEVETPMMNMIAGGAAARPFVTHHNDLDMRLYMRIAPELYLKQLIVGGLER 350
Query: 181 VYEIGRQFRNEGIDLTHNPEFTTCDF 258
VYEIG+QFRNEGIDLTHNPEFTTC+F
Sbjct: 351 VYEIGKQFRNEGIDLTHNPEFTTCEF 376
Score = 95.5 bits (227), Expect = 2e-20
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = +3
Query: 255 FYMAYADYNDLMTITESILSGMVQSIHGSYKVKYHPEGPEGKEIEIDFTPPFARVPMMAT 434
FYMA+ADYNDLM +TE +LSGMV+ + G YK+KY+ G + IEIDFTPPF R+ M+
Sbjct: 376 FYMAFADYNDLMEMTEVMLSGMVKELTGGYKIKYNANGYDKDPIEIDFTPPFRRIEMIGE 435
Query: 435 LERVLNVKLPAPDKLDTPEANDFL 506
LE+V KL P L + EAN +L
Sbjct: 436 LEKV--AKLNIPKDLASEEANKYL 457
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 515 CNTHQIECSPXRTTARXLDKLVSVXLE 595
C ++C P +TTAR LDKLV LE
Sbjct: 461 CARFDVKCPPPQTTARLLDKLVGEFLE 487
>At3g13490.1 68416.m01697 tRNA synthetase class II (D, K and N)
family protein similar to SP|Q9RHV9 Lysyl-tRNA
synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) {Bacillus
stearothermophilus}; contains Pfam profile: PF00152 tRNA
synthetases class II (D, K and N)
Length = 602
Score = 113 bits (272), Expect = 8e-26
Identities = 49/85 (57%), Positives = 65/85 (76%)
Frame = +1
Query: 1 RRFLDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDR 180
R+ +++ G+LEVETP++ GGA A+PF+T HN L DLY+RIA EL+ K ++VGG ++
Sbjct: 263 RKTVESFGYLEVETPVLQGAAGGAEARPFVTFHNSLGRDLYLRIATELHLKRMLVGGFEK 322
Query: 181 VYEIGRQFRNEGIDLTHNPEFTTCD 255
VYEIGR FRNEGI HNPEFTT +
Sbjct: 323 VYEIGRIFRNEGISTRHNPEFTTIE 347
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 258 YMAYADYNDLMTITESILSGMVQSIHGSYKVKY 356
Y AY+DY+ +M + E I++ +++G + Y
Sbjct: 349 YEAYSDYHSMMDMAELIVTQCSMAVNGKLTIDY 381
>At4g33760.1 68417.m04793 tRNA synthetase class II (D, K and N)
family protein similar to SP|P36419 Aspartyl-tRNA
synthetase (EC 6.1.1.12) (Aspartate--tRNA ligase)
(AspRS) {Thermus thermophilus}; contains Pfam profile
PF00152: tRNA synthetases class II (D, K and N)
Length = 664
Score = 57.2 bits (132), Expect = 8e-09
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 RRFL-DNMGFLEVETPLMNM-VPGGATAKPFITHHNELNMDLY-MRIAPELYHKMLVVGG 171
RR+L D GF+E+ETP+++ P GA + ++ + Y + +P+L+ +ML+V G
Sbjct: 230 RRYLEDRHGFIEIETPILSRSTPEGA--RDYLVPSRIQSGTFYALPQSPQLFKQMLMVSG 287
Query: 172 LDRVYEIGRQFRNEGIDLTHNPEFTTCD 255
D+ Y+I R FR+E + PEFT D
Sbjct: 288 FDKYYQIARCFRDEDLRADRQPEFTQLD 315
>At4g26870.1 68417.m03867 aspartyl-tRNA synthetase, putative /
aspartate--tRNA ligase, putative simialr to
aspartate-tRNA ligase (EC 6.1.1.12) from Drosophila
melanogaster GI:4512034, Homo sapiens SP|P14868, Rattus
norvegicus SP|P15178; contains Pfam profile PF00152 tRNA
synthetases class II (D, K and N)
Length = 532
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 RRFLDNMGFLEVETPLMNMVPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGLDR 180
R +L + GFLE+ TP ++ G + + + + +P+L+ +M + G + R
Sbjct: 238 REYLQSKGFLEIHTP--KLIAGSSEGGSAVFRLDYKGQPACLAQSPQLHKQMAICGDMRR 295
Query: 181 VYEIGRQFRNE-GIDLTHNPEFTTCDFTWHMRI 276
V+E+G FR E H EF D +R+
Sbjct: 296 VFEVGPVFRAEDSFTHRHLCEFVGLDVEMEIRM 328
>At4g31180.2 68417.m04427 aspartyl-tRNA synthetase, putative /
aspartate--tRNA ligase, putative similar to
Aspartyl-tRNA synthetase (Aspartate--tRNA ligase)
(AspRS) [Homo sapiens] GI:20178330
Length = 558
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 133 APELYHKMLVVGGLDRVYEIGRQFRNE-GIDLTHNPEFTTCDFTWHMR 273
+P+L+ +M + G L RV+E+G FR E H EF D +R
Sbjct: 306 SPQLHKQMAICGDLRRVFEVGPVFRAEDSFTHRHLCEFVGLDVEMEIR 353
>At4g31180.1 68417.m04426 aspartyl-tRNA synthetase, putative /
aspartate--tRNA ligase, putative similar to
Aspartyl-tRNA synthetase (Aspartate--tRNA ligase)
(AspRS) [Homo sapiens] GI:20178330
Length = 558
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 133 APELYHKMLVVGGLDRVYEIGRQFRNE-GIDLTHNPEFTTCDFTWHMR 273
+P+L+ +M + G L RV+E+G FR E H EF D +R
Sbjct: 306 SPQLHKQMAICGDLRRVFEVGPVFRAEDSFTHRHLCEFVGLDVEMEIR 353
>At5g15710.1 68418.m01837 F-box family protein unusual floral organs
protein UFO - Arabidopsis thaliana, PIR:S57710
Length = 448
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 437 QCCHHRYSSKGWCEIDFYFLTLWSFWMI 354
QC K W +I F FL W+FW++
Sbjct: 169 QCSVFSLPLKTWYKIPFTFLPPWAFWLV 196
>At4g13830.2 68417.m02143 DNAJ heat shock N-terminal
domain-containing protein (J20) identical to DnaJ-like
protein [Arabidopsis thaliana] GI:6691127; similar to
SP|Q05646 Chaperone protein dnaJ Erysipelothrix
rhusiopathiae, J11 protein [Arabidopsis thaliana]
GI:9843641; contains Pfam profile PF00226 DnaJ domain
Length = 197
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 276 YNDLMTITESILSGMVQSIHGSYKVKYHPEGPEGKEIEIDFTPPFARV 419
+ DL+ +TES+ ++ + KYHP+ +E ++T F RV
Sbjct: 67 FYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVE-EYTDRFIRV 113
>At4g13830.1 68417.m02142 DNAJ heat shock N-terminal
domain-containing protein (J20) identical to DnaJ-like
protein [Arabidopsis thaliana] GI:6691127; similar to
SP|Q05646 Chaperone protein dnaJ Erysipelothrix
rhusiopathiae, J11 protein [Arabidopsis thaliana]
GI:9843641; contains Pfam profile PF00226 DnaJ domain
Length = 155
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 276 YNDLMTITESILSGMVQSIHGSYKVKYHPEGPEGKEIEIDFTPPFARV 419
+ DL+ +TES+ ++ + KYHP+ +E ++T F RV
Sbjct: 67 FYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVE-EYTDRFIRV 113
>At4g12040.2 68417.m01916 zinc finger (AN1-like) family protein
contains Pfam domains, PF01428: AN1-like Zinc finger and
PF01754: A20-like zinc finger
Length = 175
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 491 FRCIKFIGCWEFHVK--NTFQCCHHRYSSKGWCEIDF 387
F C K +G F K +TF C HRY K C DF
Sbjct: 117 FSCNKKVGVMGFKCKCGSTF-CGSHRYPEKHECSFDF 152
>At4g12040.1 68417.m01915 zinc finger (AN1-like) family protein
contains Pfam domains, PF01428: AN1-like Zinc finger and
PF01754: A20-like zinc finger
Length = 175
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 491 FRCIKFIGCWEFHVK--NTFQCCHHRYSSKGWCEIDF 387
F C K +G F K +TF C HRY K C DF
Sbjct: 117 FSCNKKVGVMGFKCKCGSTF-CGSHRYPEKHECSFDF 152
>At5g53510.1 68418.m06650 oligopeptide transporter OPT family
protein similar to SP|P40900 Sexual differentiation
process protein isp4 {Schizosaccharomyces pombe},
oligopeptide transporter Opt1p [Candida albicans]
GI:2367386; contains Pfam profile PF03169: OPT
oligopeptide transporter protein
Length = 741
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 19 MGFLEVETPLMNM---VPGGATAKPFITHHNELNMDLYMRIAPELYHKMLVVGGL 174
+G+L E P+ NM V G + +T + + LYM+I P VVG L
Sbjct: 486 IGYLYPERPVANMCFKVYGYISMTQALTFIQDFKLGLYMKIPPRSMFMAQVVGTL 540
>At5g19290.1 68418.m02299 esterase/lipase/thioesterase family
protein low similarity to monoglyceride lipase [Homo
sapiens] GI:14594904; contains Interpro entry IPR000379
Length = 330
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +1
Query: 25 FLEVETPLMNMVPGGATAKPFIT----HHNELNMDLYMRIAPELYHKML 159
F EVE PL+ + GG H ++ D ++I PEL+H+M+
Sbjct: 247 FEEVEVPLLIVHGGGDVVCDVACVEELHRRAISEDKTIKIYPELWHQMI 295
>At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 370
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 363 EGPEGKEIEIDFTPPFARVPMMATLERVLNVKLPAPDKLDTPEANDFLK 509
E P+ EI+ P +P M +++ KLP KL+ P+ + K
Sbjct: 209 EAPKVPEIQKPELPKMPELPKMPEIQKPELPKLPEVPKLEAPKVPEIQK 257
>At1g02205.2 68414.m00154 CER1 protein identical to maize gl1
homolog (glossy1 locus) GI:1209703 and CER1 GI:1199467
from [Arabidopsis thaliana]
Length = 625
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 94 HHNEL--NMDLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCDFTWH 267
HH + N L+M + +Y M D +YE + ++ +D+ H TT + +H
Sbjct: 251 HHTQFRTNYSLFMPLYDYIYGTM--DESTDTLYEKTLERGDDIVDVVHLTHLTTPESIYH 308
Query: 268 MRI 276
+RI
Sbjct: 309 LRI 311
>At1g02205.1 68414.m00153 CER1 protein identical to maize gl1
homolog (glossy1 locus) GI:1209703 and CER1 GI:1199467
from [Arabidopsis thaliana]
Length = 580
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 94 HHNEL--NMDLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCDFTWH 267
HH + N L+M + +Y M D +YE + ++ +D+ H TT + +H
Sbjct: 251 HHTQFRTNYSLFMPLYDYIYGTM--DESTDTLYEKTLERGDDIVDVVHLTHLTTPESIYH 308
Query: 268 MRI 276
+RI
Sbjct: 309 LRI 311
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,750,329
Number of Sequences: 28952
Number of extensions: 293880
Number of successful extensions: 639
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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