Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0203
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   2.7  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   3.5  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   3.5  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   4.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   4.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   4.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   4.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   6.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.2  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   6.2  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   6.2  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.1  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.1  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.1  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +3

Query: 189 PDSKILTLQFDKNSLTIEW--DDKTLQNFKADFLSQFDYKTWXNNRRLK 329
           P SK  TL+ +K  L   +    K  +  +   L++   K W  NRR+K
Sbjct: 249 PYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQNRRMK 297


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLKPR 335
           LS+   K W  NRR K R
Sbjct: 196 LSERQIKIWFQNRRAKER 213


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLKPR 335
           LS+   K W  NRR K R
Sbjct: 195 LSERQVKIWFQNRRAKER 212


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLK 329
           LS+   K W  NRR+K
Sbjct: 127 LSERQIKIWFQNRRMK 142


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLK 329
           LS+   K W  NRR+K
Sbjct: 272 LSERQIKIWFQNRRMK 287


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLK 329
           LS+   K W  NRR+K
Sbjct: 118 LSERQIKIWFQNRRMK 133


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLK 329
           LS+   K W  NRR+K
Sbjct: 272 LSERQIKIWFQNRRMK 287


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLK 329
           LS+   K W  NRR+K
Sbjct: 156 LSEKQVKIWFQNRRVK 171


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLKPR 335
           L++   K W  NRR+K +
Sbjct: 292 LNETQVKIWFQNRRMKQK 309


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLKPR 335
           L++   K W  NRR+K +
Sbjct: 81  LNETQVKIWFQNRRMKQK 98


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLKPR 335
           L++   K W  NRR+K +
Sbjct: 81  LNETQVKIWFQNRRMKQK 98


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLKPRLWR 344
           L +   K W  NRR+K +  R
Sbjct: 110 LPESTIKVWFQNRRMKDKRQR 130


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLKPR 335
           L++   K W  NRR+K +
Sbjct: 222 LTERQIKIWFQNRRMKAK 239


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLK 329
           L++   K W  NRR+K
Sbjct: 43  LTERQVKVWFQNRRMK 58


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLKPR 335
           L++   K W  NRR+K +
Sbjct: 222 LTERQIKIWFQNRRMKAK 239


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLKPR 335
           L++   K W  NRR+K +
Sbjct: 222 LTERQIKIWFQNRRMKAK 239


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 282 LSQFDYKTWXNNRRLK 329
           L++   K W  NRR+K
Sbjct: 174 LTERQVKVWFQNRRMK 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,546
Number of Sequences: 336
Number of extensions: 1910
Number of successful extensions: 35
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)