Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0203
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35552| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_39277| Best HMM Match : Gamma-BBH (HMM E-Value=0.02) 43 1e-04
SB_28563| Best HMM Match : Gamma-BBH (HMM E-Value=0) 43 1e-04
SB_10799| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_10794| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_24287| Best HMM Match : Homeobox (HMM E-Value=9e-28) 29 2.8
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 28 3.7
SB_53490| Best HMM Match : Orthopox_C1 (HMM E-Value=8.6) 28 3.7
SB_35488| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 28 3.7
SB_49069| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_31881| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_29609| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_29264| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_25359| Best HMM Match : p450 (HMM E-Value=0) 28 4.9
SB_38084| Best HMM Match : IL15 (HMM E-Value=4.1) 28 4.9
SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 28 4.9
SB_35551| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_30009| Best HMM Match : RVT_1 (HMM E-Value=1.2e-18) 27 6.5
SB_25444| Best HMM Match : SH2 (HMM E-Value=6.4) 27 6.5
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 27 6.5
SB_44727| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_25299| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23) 27 6.5
SB_13703| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_1533| Best HMM Match : RVT_1 (HMM E-Value=0.0074) 27 6.5
>SB_35552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 111 WLRDHCRCSQCYHANTFQRAKHILELPDSKILTLQFDKN----SLTIEWDDKTLQNFKAD 278
+LRDHC CS CYH + QR H+ L D K+L N L+I WDD + F +
Sbjct: 85 YLRDHCLCSTCYHPTSEQRLTHMKNL-DLKVLPSNVHVNDIEGKLSITWDDGHVSEFDSK 143
Query: 279 FL 284
+L
Sbjct: 144 WL 145
>SB_39277| Best HMM Match : Gamma-BBH (HMM E-Value=0.02)
Length = 210
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 111 WLRDHCRCSQCYHANTFQRAKHILELP-DSKILTLQFDKNSLTIEWDDKTLQNF 269
+LRDHC C+ CYH + QR +I L + K + + L+I W D+ + F
Sbjct: 67 YLRDHCACASCYHQTSQQRLNYITNLDLNIKPSKVHIREGLLSITWTDRHVSEF 120
>SB_28563| Best HMM Match : Gamma-BBH (HMM E-Value=0)
Length = 448
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 111 WLRDHCRCSQCYHANTFQRAKHILELP-DSKILTLQFDKNSLTIEWDDKTLQNF 269
+LRDHC C+ CYH + QR +I L + K + + L+I W D+ + F
Sbjct: 93 YLRDHCACASCYHQTSQQRLNYITNLDLNIKPSKVHIREGLLSITWTDRHVSEF 146
>SB_10799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 33.1 bits (72), Expect = 0.13
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 111 WLRDHCRCSQCYHANTFQRAKHILELPDSKILTLQFDKNSLTIEWDDKTLQ-NFKADFLS 287
+LRD+C+C +CY++ QR L + L ++ + D K + + + +S
Sbjct: 65 YLRDNCQCPKCYNSLLLQR-----NLDSISEVDLDVKPKAVEVRDDGKQIHITWPNEHIS 119
Query: 288 QFDYKTWXNNRRL 326
QF+ W +N++L
Sbjct: 120 QFN-SAWLHNKKL 131
>SB_10794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +3
Query: 111 WLRDHCRCSQCYHANTFQRAKHILELPD----SKILTLQFDKNSLTIEWDDKTLQNFKAD 278
+LRD+C+C +CY++ QR + D K + ++ D + I W ++ + F +
Sbjct: 65 YLRDNCQCPKCYNSLLLQRNLDSISEVDLDVKPKAVEMRDDGKQIHITWPNEHISQFNSA 124
Query: 279 FL 284
+L
Sbjct: 125 WL 126
>SB_24287| Best HMM Match : Homeobox (HMM E-Value=9e-28)
Length = 561
Score = 28.7 bits (61), Expect = 2.8
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 144 YHANTFQRAKHILELPDSKILTLQF-DKNSLTIEWDDKTLQNFKADFLSQFDYKTWXNNR 320
YH++ +R + K L +F +K LTI ++ K+ +LS KTW NR
Sbjct: 428 YHSSKSRRKRTAFTSSQLKYLEEKFQEKKYLTISERNELA---KSMYLSDTQVKTWFQNR 484
Query: 321 RLK 329
R K
Sbjct: 485 RTK 487
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 123 HCRCSQCYHANTFQRAKHILELPDSKILTLQFDKN--SLTIEWDDKT 257
H + + + +RA ++ P KIL + +DKN LTI + D T
Sbjct: 814 HSNVLEAEESTSAERANRAVDRPPVKILGIPWDKNKDELTIAFSDST 860
>SB_53490| Best HMM Match : Orthopox_C1 (HMM E-Value=8.6)
Length = 392
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +3
Query: 192 DSKILTLQFDKNSLTIEWDDKTLQ--NFKADFLSQFD--YKTWXNN 317
D KI+ +K T +W+DK+L N F+ D KTW N+
Sbjct: 256 DKKIVESFLEKKGFTYKWEDKSLSYWNILPAFIPHPDTGEKTWFNH 301
>SB_35488| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1019
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 123 HCRCSQCYHANTFQRAKHILELPDSKILTLQFDKN--SLTIEWDDKT 257
H + + + +RA ++ P KIL + +DKN LTI + D T
Sbjct: 493 HSNVLEAEESTSAERANRAVDRPPVKILGIPWDKNKDELTIAFSDST 539
>SB_49069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 108 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK-ILTLQFDKNSLTIEWDDKTLQNFKADF 281
C++RD +CS ++ NT A H L LP ++ L K W+ L+ +A
Sbjct: 75 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKARTTLAKNSFKFVAAKRWNALPLEIKEAKS 134
Query: 282 LSQFDYK 302
++ F K
Sbjct: 135 ITAFSAK 141
>SB_31881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 108 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK-ILTLQFDKNSLTIEWDDKTLQNFKADF 281
C++RD +CS ++ NT A H L LP ++ L K W+ L+ +A
Sbjct: 75 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKARTTLAKNSFKFVAAKRWNALPLEIKEAKS 134
Query: 282 LSQFDYK 302
++ F K
Sbjct: 135 ITAFSAK 141
>SB_29609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 108 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK-ILTLQFDKNSLTIEWDDKTLQNFKADF 281
C++RD +CS ++ NT A H L LP ++ L K W+ L+ +A
Sbjct: 159 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKARTTLAKNSFKFVAAKRWNALPLEIKEAKS 218
Query: 282 LSQFDYK 302
++ F K
Sbjct: 219 ITAFSAK 225
>SB_29264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 108 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK-ILTLQFDKNSLTIEWDDKTLQNFKADF 281
C++RD +CS ++ NT A H L LP ++ L K W+ L+ +A
Sbjct: 55 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKARTTLAKNSFKFVAAKRWNALPLEIKEAKS 114
Query: 282 LSQFDYK 302
++ F K
Sbjct: 115 ITAFSAK 121
>SB_25359| Best HMM Match : p450 (HMM E-Value=0)
Length = 1084
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 123 HCRCSQCYHANTFQRAKHILELPDSKILTLQFDKN--SLTIEWDDKT 257
H + + + +RA ++ P KIL + +DKN LTI + D T
Sbjct: 201 HSNVLEAEESTSAERADRAVDRPPVKILGIPWDKNKDELTIAFSDST 247
>SB_38084| Best HMM Match : IL15 (HMM E-Value=4.1)
Length = 164
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 108 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK-ILTLQFDKNSLTIEWDDKTLQNFKADF 281
C++RD +CS ++ NT A H L LP ++ L K W+ L+ +A
Sbjct: 55 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKARTTLAKNSFKFVAAKRWNALPLEIKEAKS 114
Query: 282 LSQFDYK 302
++ F K
Sbjct: 115 ITAFSAK 121
>SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 204 LTLQFDKNSLTIEWDDKTLQNFKADFLSQFDYKTWXNNRRLK 329
L FDKN + + K L ++ LS+ K W NRR K
Sbjct: 147 LETSFDKNHYVVGTERKQLASYLK--LSETQVKVWFQNRRTK 186
>SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33)
Length = 1485
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 123 HCRCSQCYHANTFQRAKHILELPDSKILTLQFDKN--SLTIEWDDKT 257
H + + + +RA ++ P KIL + +DKN LTI + D T
Sbjct: 727 HSNVLEAEESTSAERADRAVDRPPVKILGIPWDKNKDELTIAFSDST 773
>SB_35551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 108 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 200
C++RD +CS ++ NT A H L LP ++
Sbjct: 301 CYIRDMFVKCSNVHNKNTKNAANHNLVLPKAR 332
>SB_30009| Best HMM Match : RVT_1 (HMM E-Value=1.2e-18)
Length = 552
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 108 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 200
C++RD +CS ++ NT A H L LP ++
Sbjct: 506 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKAR 537
>SB_25444| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 252
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 108 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 200
C++RD +CS ++ NT A H L LP ++
Sbjct: 206 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKAR 237
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 123 HCRCSQCYHANTFQRAKHILELPDSKILTLQFDKN--SLTIEWDDKT 257
H + + + +RA ++ P KIL + +DKN LTI + D T
Sbjct: 173 HSNVLEAEESTSAERADRAVDRPPVKILGVPWDKNKDELTIAFSDST 219
>SB_44727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 108 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 200
C++RD +CS ++ NT A H L LP ++
Sbjct: 55 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKAR 86
>SB_25299| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23)
Length = 407
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 108 CWLRD-HCRCSQCYHANTFQRAKHILELPDSK 200
C++RD +CS ++ NT A H L LP ++
Sbjct: 366 CYIRDMFVKCSDVHNKNTKNAANHNLVLPKAR 397
>SB_13703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1358
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 123 HCRCSQCYHANTFQRAKHILELPDSKILTLQFDKN--SLTIEWDDKT 257
H + + + +RA ++ P KIL + +DKN LTI + D T
Sbjct: 537 HSNVLEVEESTSAERADRAVDRPPVKILGIPWDKNKDELTIAFSDST 583
>SB_1533| Best HMM Match : RVT_1 (HMM E-Value=0.0074)
Length = 503
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 123 HCRCSQCYHANTFQRAKHILELPDSKILTLQFDKN--SLTIEWDDKT 257
H + + + +RA ++ P KIL + +DKN LTI + D T
Sbjct: 417 HSNVLEVEESTSAERADRAVDRPPVKILGIPWDKNKDELTIAFSDST 463
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,533,827
Number of Sequences: 59808
Number of extensions: 235744
Number of successful extensions: 509
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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