Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0203
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66523-7|CAA91416.2|  409|Caenorhabditis elegans Hypothetical pr...    37   0.009
U80445-7|AAB37798.1|  368|Caenorhabditis elegans Hypothetical pr...    28   3.3  
U80437-6|AAB37621.1|  368|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z81134-8|CAB57908.1|  366|Caenorhabditis elegans Hypothetical pr...    27   5.7  
AL117202-33|CAB55097.1|  366|Caenorhabditis elegans Hypothetical...    27   5.7  
AF039051-7|AAB94267.2|  304|Caenorhabditis elegans Serpentine re...    27   5.7  
Z81522-8|CAB04231.2|  786|Caenorhabditis elegans Hypothetical pr...    27   10.0 
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p...    27   10.0 
AF038614-7|AAB92060.2|  664|Caenorhabditis elegans Hypothetical ...    27   10.0 

>Z66523-7|CAA91416.2|  409|Caenorhabditis elegans Hypothetical
           protein M05D6.7 protein.
          Length = 409

 Score = 36.7 bits (81), Expect = 0.009
 Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
 Frame = +3

Query: 63  VRVNFENGPS-IPXEDCWLRDHCRCSQCYHANTFQRAKHILELPD-SKI-----LTLQFD 221
           +R   E  PS +     WLRDHC   + YH  T QR  +  ++   SKI     + +   
Sbjct: 31  IRYENEGNPSKLIMPFVWLRDHCTSQKLYHLPTNQRKSNCCDITSLSKIKHSNQVIIDEA 90

Query: 222 KNSLTIEWDDKTLQNFK 272
            NSL I W D     FK
Sbjct: 91  TNSLQIVWIDGHQSKFK 107


>U80445-7|AAB37798.1|  368|Caenorhabditis elegans Hypothetical
           protein C50F2.5 protein.
          Length = 368

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +3

Query: 171 KHILELPDSKILTLQFDKNSLTIEWDDKTLQNFKADFLSQFDYKTWXNNR 320
           K+ LEL DS+++    DKNS     DD    N+K+  L  F   TW   +
Sbjct: 190 KYELELTDSEVV---IDKNS-----DDPNASNYKSHRLIVFHMNTWSGQK 231


>U80437-6|AAB37621.1|  368|Caenorhabditis elegans Hypothetical
           protein C43E11.5 protein.
          Length = 368

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +3

Query: 171 KHILELPDSKILTLQFDKNSLTIEWDDKTLQNFKADFLSQFDYKTWXNNR 320
           K+ LEL DS+++    DKNS     DD    N+K+  L  F   TW   +
Sbjct: 190 KYELELTDSEVV---IDKNS-----DDPNASNYKSHRLIVFHMNTWSGQK 231


>Z81134-8|CAB57908.1|  366|Caenorhabditis elegans Hypothetical
           protein T28D6.6 protein.
          Length = 366

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 349 CNXADRIAKVHVDEFLTLTTVXGVFQ 426
           CN A   ++V   EF TLTTV GV +
Sbjct: 80  CNLAGVFSEVAAYEFTTLTTVPGVIR 105


>AL117202-33|CAB55097.1|  366|Caenorhabditis elegans Hypothetical
           protein T28D6.6 protein.
          Length = 366

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 349 CNXADRIAKVHVDEFLTLTTVXGVFQ 426
           CN A   ++V   EF TLTTV GV +
Sbjct: 80  CNLAGVFSEVAAYEFTTLTTVPGVIR 105


>AF039051-7|AAB94267.2|  304|Caenorhabditis elegans Serpentine
           receptor, class x protein8 protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -1

Query: 55  LNKDDVFYFFRTVFI 11
           LN+ DVF F+RT+FI
Sbjct: 113 LNRQDVFTFYRTIFI 127


>Z81522-8|CAB04231.2|  786|Caenorhabditis elegans Hypothetical
           protein F32B4.8 protein.
          Length = 786

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 183 ELPDSKILTLQFDKNSLTIEWDDKTLQNFK 272
           ELPD+++++++ DKN  T E    T +  K
Sbjct: 387 ELPDTELVSMETDKNGKTFEQRQTTHEGRK 416


>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
           protein 1 protein.
          Length = 1845

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -1

Query: 286 DRKSALKFCSVLSSHSIVRLFLSNCNVSIFESGSSKMCLAL 164
           + K    +CS L S    RL   N  + I E+G +K C  L
Sbjct: 506 EEKDTAAYCSKLPSDIFTRLVPHNQIIPIEENGVTKYCAEL 546


>AF038614-7|AAB92060.2|  664|Caenorhabditis elegans Hypothetical
           protein F15E6.9 protein.
          Length = 664

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 261 QNFKADFLSQFDYKTWXNNRRLK 329
           +NFK +FL+ F  K W  NR++K
Sbjct: 640 KNFK-EFLTNFSGKEWNRNRQIK 661


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,130,855
Number of Sequences: 27780
Number of extensions: 182104
Number of successful extensions: 447
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)