Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0202
(499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 70 3e-11
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 68 1e-10
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 63 3e-09
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 59 6e-08
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 54 2e-06
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 52 5e-06
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 52 1e-05
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 49 5e-05
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 48 9e-05
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 45 0.001
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 43 0.003
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 41 0.013
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 41 0.013
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 40 0.031
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 38 0.095
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 38 0.095
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 35 0.88
UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA... 32 6.2
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 32 6.2
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 70.1 bits (164), Expect = 3e-11
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
++ ARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 42.7 bits (96), Expect = 0.004
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QTSAESW NMCRGGRMFAPTK W
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 68.1 bits (159), Expect = 1e-10
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +1
Query: 67 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
MSL ARPLVSVY+EK+E + LP VFK PIRPD+VN+VH + +N+RQ Y V
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAV 57
Score = 42.3 bits (95), Expect = 0.006
Identities = 25/73 (34%), Positives = 29/73 (39%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPWXXXXXXXXXXXX 433
QTSAESW NMCRGGRMFAPTK +
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123
Query: 434 XAAXXAXVAATGV 472
A + +AA+GV
Sbjct: 124 RYALVSAIAASGV 136
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 63.3 bits (147), Expect = 3e-09
Identities = 32/54 (59%), Positives = 37/54 (68%)
Frame = +1
Query: 82 ARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCVRR 243
ARP VSVYS S++V G PLP VF PIR D+V VH +M+KNSRQ Y V R
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNR 55
Score = 34.7 bits (76), Expect = 1.2
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +2
Query: 353 NMCRGGRMFAPTKPWXXXXXXXXXXXXXAAXXAXVAATGVXS 478
NMCRGGRMFAPTK + A + +AA+ V S
Sbjct: 93 NMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSVPS 134
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 58.8 bits (136), Expect = 6e-08
Identities = 29/55 (52%), Positives = 33/55 (60%)
Frame = +1
Query: 82 ARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCVRRR 246
+RP VSV S T G PLP VF PIRPD+V VH M+KN RQPY V +
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEK 56
Score = 42.7 bits (96), Expect = 0.004
Identities = 25/73 (34%), Positives = 28/73 (38%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPWXXXXXXXXXXXX 433
QTSAESW NMCR GRMFAPTK W
Sbjct: 60 QTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQK 119
Query: 434 XAAXXAXVAATGV 472
A + +AA+GV
Sbjct: 120 RFATVSALAASGV 132
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 53.6 bits (123), Expect = 2e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = +1
Query: 79 VARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCVRR 243
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y + R
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISR 55
Score = 33.9 bits (74), Expect = 2.0
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPWXXXXXXXXXXXX 433
QTSA SW N CR G MFAPT+ W
Sbjct: 60 QTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEK 119
Query: 434 XAAXXAXVAAT 466
A VAAT
Sbjct: 120 RLALAVSVAAT 130
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 52.4 bits (120), Expect = 5e-06
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
++ ARP+VSV+ T ++ PLP VF P+R DLV V +MSKN RQ Y V
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGV 55
Score = 36.7 bits (81), Expect = 0.29
Identities = 23/75 (30%), Positives = 26/75 (34%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPWXXXXXXXXXXXX 433
Q SAESW NMCRGG MF+P K +
Sbjct: 62 QHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEK 121
Query: 434 XAAXXAXVAATGVXS 478
A A +AATG S
Sbjct: 122 RHAVAAAIAATGCPS 136
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +1
Query: 88 PLVSVYSEKSET-VQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAV 55
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 49.2 bits (112), Expect = 5e-05
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +1
Query: 100 VYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
VY++KSE + LP VF+ P+RPD+V+ VH + KN RQPY V
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAV 171
Score = 38.7 bits (86), Expect = 0.072
Identities = 20/46 (43%), Positives = 20/46 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTK 391
QTSAESW NMCRGGRMFAPTK
Sbjct: 178 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 223
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 48.4 bits (110), Expect = 9e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCVR 240
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V+
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVK 55
Score = 40.7 bits (91), Expect = 0.018
Identities = 24/79 (30%), Positives = 29/79 (36%)
Frame = +2
Query: 242 GGWSQTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPWXXXXXXXX 421
G +TSAESW NMCRGG MF PTK W
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKIN 116
Query: 422 XXXXXAAXXAXVAATGVXS 478
A + +AA+G+ S
Sbjct: 117 LKEKRYAVCSSIAASGITS 135
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 44.8 bits (101), Expect = 0.001
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = +1
Query: 85 RPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCVRR 243
RP VSV++ GA +P VF P+R DLV VH +MSKN RQ Y V +
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSK 55
Score = 33.1 bits (72), Expect = 3.6
Identities = 20/73 (27%), Positives = 24/73 (32%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPWXXXXXXXXXXXX 433
QTSA SW N CR G M+APT+ W
Sbjct: 60 QTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEK 119
Query: 434 XAAXXAXVAATGV 472
A + +AAT V
Sbjct: 120 RQALASALAATAV 132
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 43.2 bits (97), Expect = 0.003
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +1
Query: 88 PLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCVRR 243
P V V+ V A P P VF P+RPD++N VH + K R PY V R
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSR 52
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 41.1 bits (92), Expect = 0.013
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +1
Query: 82 ARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQP 228
+RP V++Y + + LP VF PIR D+V+ V+ + SKN+RQP
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQP 51
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 41.1 bits (92), Expect = 0.013
Identities = 24/72 (33%), Positives = 27/72 (37%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPWXXXXXXXXXXXX 433
QTSAESW NMCR GRMFAPTK W
Sbjct: 37 QTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLNQK 96
Query: 434 XAAXXAXVAATG 469
A + +AA+G
Sbjct: 97 RFATASALAASG 108
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 39.9 bits (89), Expect = 0.031
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +1
Query: 331 VRSXCLR*HVSWWTYVRPHEALAALAPSRQP 423
VR C+R HV WW +VR E L LAP QP
Sbjct: 138 VRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 38.3 bits (85), Expect = 0.095
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 91 LVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPY 231
L +VY+ + A P + PIRPD+V+ VH++++KN RQP+
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRYS-PIRPDVVHFVHMNLAKNERQPF 52
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 38.3 bits (85), Expect = 0.095
Identities = 17/51 (33%), Positives = 36/51 (70%)
Frame = +1
Query: 79 VARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPY 231
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPH 49
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 35.1 bits (77), Expect = 0.88
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 130 GAAKPLPFVFKXPIRPDLVNDVHVSMSKN 216
GA+ +P VF PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 1; n=2; Roseiflexus|Rep: HAD-superfamily
hydrolase, subfamily IA, variant 1 - Roseiflexus sp.
RS-1
Length = 223
Score = 32.3 bits (70), Expect = 6.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 154 RTGGA-WLHPAPSHSSLNTPTLKVGLPIDSFRYFSEAIPP 38
R GG WLH A SH P +++GLP+ E +PP
Sbjct: 163 RIGGLRWLHAAQSHFHDVVPAVQMGLPVAWINRKHEPLPP 202
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 32.3 bits (70), Expect = 6.2
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 88 PLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPY 231
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPY 46
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,712,668
Number of Sequences: 1657284
Number of extensions: 5775518
Number of successful extensions: 13080
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13076
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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