Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0202
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 73 6e-13
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 71 3e-12
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 70 4e-12
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 70 4e-12
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 70 4e-12
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 70 4e-12
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 70 4e-12
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 70 4e-12
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 70 4e-12
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 70 4e-12
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 70 4e-12
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 70 4e-12
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 70 4e-12
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 70 4e-12
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 72.9 bits (171), Expect = 6e-13
Identities = 38/71 (53%), Positives = 48/71 (67%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCVRRRLV 252
++VARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V L
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAV-SELA 58
Query: 253 TNQCRIMGYRT 285
+Q R + T
Sbjct: 59 GHQTRAESWGT 69
Score = 40.7 bits (91), Expect = 0.003
Identities = 20/48 (41%), Positives = 20/48 (41%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QT AESW NMCRGGRMFAPTK W
Sbjct: 61 QTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 70.5 bits (165), Expect = 3e-12
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +1
Query: 70 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
+++ ARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 68
Score = 42.7 bits (96), Expect = 7e-04
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QTSAESW NMCRGGRMFAPTK W
Sbjct: 75 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 122
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 70.1 bits (164), Expect = 4e-12
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
++ ARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 42.7 bits (96), Expect = 7e-04
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QTSAESW NMCRGGRMFAPTK W
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 70.1 bits (164), Expect = 4e-12
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
++ ARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 42.7 bits (96), Expect = 7e-04
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QTSAESW NMCRGGRMFAPTK W
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 70.1 bits (164), Expect = 4e-12
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
++ ARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 42.7 bits (96), Expect = 7e-04
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QTSAESW NMCRGGRMFAPTK W
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 70.1 bits (164), Expect = 4e-12
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
++ ARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 42.7 bits (96), Expect = 7e-04
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QTSAESW NMCRGGRMFAPTK W
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 70.1 bits (164), Expect = 4e-12
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
++ ARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 42.7 bits (96), Expect = 7e-04
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QTSAESW NMCRGGRMFAPTK W
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 70.1 bits (164), Expect = 4e-12
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
++ ARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 42.7 bits (96), Expect = 7e-04
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QTSAESW NMCRGGRMFAPTK W
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 70.1 bits (164), Expect = 4e-12
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
++ ARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 42.7 bits (96), Expect = 7e-04
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QTSAESW NMCRGGRMFAPTK W
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 70.1 bits (164), Expect = 4e-12
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
++ ARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 42.7 bits (96), Expect = 7e-04
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QTSAESW NMCRGGRMFAPTK W
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 70.1 bits (164), Expect = 4e-12
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
++ ARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 42.7 bits (96), Expect = 7e-04
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QTSAESW NMCRGGRMFAPTK W
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 70.1 bits (164), Expect = 4e-12
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
++ ARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 42.7 bits (96), Expect = 7e-04
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QTSAESW NMCRGGRMFAPTK W
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 70.1 bits (164), Expect = 4e-12
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
++ ARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAV 54
Score = 42.7 bits (96), Expect = 7e-04
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QTSAESW NMCRGGRMFAPTK W
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 70.1 bits (164), Expect = 4e-12
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
++ ARPL+SVYSEK E+ G LP VFK PIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 42.7 bits (96), Expect = 7e-04
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +2
Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPW 397
QTSAESW NMCRGGRMFAPTK W
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,225,759
Number of Sequences: 237096
Number of extensions: 934572
Number of successful extensions: 1514
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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