Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0202
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...    68   6e-12
BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p pro...    68   6e-12
AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...    68   6e-12
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...    68   6e-12
X06881-1|CAA29998.1|  123|Drosophila melanogaster protein ( Dros...    42   4e-04
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro...    30   2.0  
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P...    30   2.0  

>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 33/57 (57%), Positives = 41/57 (71%)
 Frame = +1

Query: 67  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
           MSL  ARPLVSVY+EK+E  +     LP VFK PIRPD+VN+VH  + +N+RQ Y V
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAV 57



 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 25/73 (34%), Positives = 29/73 (39%)
 Frame = +2

Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPWXXXXXXXXXXXX 433
           QTSAESW                          NMCRGGRMFAPTK +            
Sbjct: 64  QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123

Query: 434 XAAXXAXVAATGV 472
             A  + +AA+GV
Sbjct: 124 RYALVSAIAASGV 136


>BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p
           protein.
          Length = 233

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 33/57 (57%), Positives = 41/57 (71%)
 Frame = +1

Query: 67  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
           MSL  ARPLVSVY+EK+E  +     LP VFK PIRPD+VN+VH  + +N+RQ Y V
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAV 57



 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 25/73 (34%), Positives = 29/73 (39%)
 Frame = +2

Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPWXXXXXXXXXXXX 433
           QTSAESW                          NMCRGGRMFAPTK +            
Sbjct: 64  QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123

Query: 434 XAAXXAXVAATGV 472
             A  + +AA+GV
Sbjct: 124 RYALVSAIAASGV 136


>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 33/57 (57%), Positives = 41/57 (71%)
 Frame = +1

Query: 67  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
           MSL  ARPLVSVY+EK+E  +     LP VFK PIRPD+VN+VH  + +N+RQ Y V
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAV 57



 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 25/73 (34%), Positives = 29/73 (39%)
 Frame = +2

Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPWXXXXXXXXXXXX 433
           QTSAESW                          NMCRGGRMFAPTK +            
Sbjct: 64  QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123

Query: 434 XAAXXAXVAATGV 472
             A  + +AA+GV
Sbjct: 124 RYALVSAIAASGV 136


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 33/57 (57%), Positives = 41/57 (71%)
 Frame = +1

Query: 67  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKXPIRPDLVNDVHVSMSKNSRQPYCV 237
           MSL  ARPLVSVY+EK+E  +     LP VFK PIRPD+VN+VH  + +N+RQ Y V
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAV 57



 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 25/73 (34%), Positives = 29/73 (39%)
 Frame = +2

Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPWXXXXXXXXXXXX 433
           QTSAESW                          NMCRGGRMFAPTK +            
Sbjct: 64  QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123

Query: 434 XAAXXAXVAATGV 472
             A  + +AA+GV
Sbjct: 124 RYALVSAIAASGV 136


>X06881-1|CAA29998.1|  123|Drosophila melanogaster protein (
           Drosophila gene forribosomal protein L1 fragment. ).
          Length = 123

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 25/73 (34%), Positives = 29/73 (39%)
 Frame = +2

Query: 254 QTSAESWXXXXXXXXXXXXXXXXXXXXXXXXXXNMCRGGRMFAPTKPWXXXXXXXXXXXX 433
           QTSAESW                          NMCRGGRMFAPTK +            
Sbjct: 2   QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQR 61

Query: 434 XAAXXAXVAATGV 472
             A  + +AA+GV
Sbjct: 62  RYALVSAIAASGV 74


>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
           protein.
          Length = 1953

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +3

Query: 72  SIGSPTFSVGVFREE*DGAGCSQAPPVRIQG--AHTSGPG 185
           ++GSP ++VG       G G S APP  +    AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326


>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
           protein.
          Length = 2528

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +3

Query: 72  SIGSPTFSVGVFREE*DGAGCSQAPPVRIQG--AHTSGPG 185
           ++GSP ++VG       G G S APP  +    AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,490,348
Number of Sequences: 53049
Number of extensions: 277577
Number of successful extensions: 617
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)