Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0201
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 285 2e-77
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 280 5e-76
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 275 2e-74
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 163 1e-40
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 132 1e-31
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 124 6e-29
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 122 2e-28
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 121 4e-28
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 1e-27
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 120 1e-27
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 2e-27
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 4e-27
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 92 2e-19
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 9e-18
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-17
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 74 9e-14
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 71 8e-13
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 68 4e-12
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 65 3e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 44 1e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 40 0.001
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 34 0.067
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 33 0.15
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 0.82
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 1.9
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 3.3
SB_59549| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7) 28 5.8
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_37204| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-25) 27 7.6
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 285 bits (699), Expect = 2e-77
Identities = 130/146 (89%), Positives = 135/146 (92%)
Frame = +3
Query: 39 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 218
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 219 NEASGGQVRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 398
NEA+GG+ +LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 265 NEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 324
Query: 399 LVDSVLDVVRKEAESCDCLQGFQLTH 476
LVDSVLDVVRKEAESCDCLQGFQLTH
Sbjct: 325 LVDSVLDVVRKEAESCDCLQGFQLTH 350
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 280 bits (687), Expect = 5e-76
Identities = 127/137 (92%), Positives = 130/137 (94%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 245
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 APRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAESCDCLQGFQLTH
Sbjct: 121 RKEAESCDCLQGFQLTH 137
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 275 bits (674), Expect = 2e-74
Identities = 122/137 (89%), Positives = 130/137 (94%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 245
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 APRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAESCDC+QGFQLTH
Sbjct: 121 RKEAESCDCIQGFQLTH 137
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 182 bits (443), Expect = 2e-46
Identities = 82/92 (89%), Positives = 85/92 (92%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 245
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 APRILVDLEPGTMDSVRSGPFGQIFRPDNFVF 341
ILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 163 bits (395), Expect = 1e-40
Identities = 74/77 (96%), Positives = 76/77 (98%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 6 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 65
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAESCDC+QGFQLTH
Sbjct: 66 RKEAESCDCIQGFQLTH 82
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 132 bits (320), Expect = 1e-31
Identities = 57/81 (70%), Positives = 68/81 (83%)
Frame = +3
Query: 228 SGGQVRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 407
+GG+ ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 408 SVLDVVRKEAESCDCLQGFQL 470
++ DV+RKEAE+CDC+QG QL
Sbjct: 71 NIFDVLRKEAENCDCMQGVQL 91
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 124 bits (298), Expect = 6e-29
Identities = 60/139 (43%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 239
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 240 VRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 420 VVRKEAESCDCLQGFQLTH 476
+RK A+ C LQGF + H
Sbjct: 121 RIRKLADQCTGLQGFLIFH 139
Score = 121 bits (292), Expect = 3e-28
Identities = 58/138 (42%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 242
RE + I GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 243 RAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 422
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 423 VRKEAESCDCLQGFQLTH 476
+RK A+ C LQGF + H
Sbjct: 555 IRKLADQCTGLQGFLIFH 572
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 122 bits (294), Expect = 2e-28
Identities = 58/139 (41%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 239
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 240 VRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 420 VVRKEAESCDCLQGFQLTH 476
+RK A+ C LQGF + H
Sbjct: 706 RIRKLADQCTGLQGFLIFH 724
Score = 120 bits (290), Expect = 6e-28
Identities = 57/138 (41%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 242
RE + + GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 243 RAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 422
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 185
Query: 423 VRKEAESCDCLQGFQLTH 476
+RK A+ C LQGF + H
Sbjct: 186 IRKLADQCTGLQGFLIFH 203
Score = 50.8 bits (116), Expect = 7e-07
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQV 242
RE + I GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 243 RAPRILVDLEPGTMDSV 293
+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 121 bits (291), Expect = 4e-28
Identities = 57/138 (41%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 242
RE + I GQ G QIG WE+ EHGI P G D + + N +++E G+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 243 RAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 422
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 423 VRKEAESCDCLQGFQLTH 476
+RK A+ C LQGF + H
Sbjct: 121 IRKLADQCTGLQGFLIFH 138
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 120 bits (288), Expect = 1e-27
Identities = 55/139 (39%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 239
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 240 VRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 420 VVRKEAESCDCLQGFQLTH 476
+RK A+ C LQGF + H
Sbjct: 121 RLRKLADGCTGLQGFLIFH 139
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 120 bits (288), Expect = 1e-27
Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 239
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 240 VRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 420 VVRKEAESCDCLQGFQLTH 476
RK A+ C LQGF + H
Sbjct: 121 RCRKLADQCTGLQGFLIFH 139
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 118 bits (285), Expect = 2e-27
Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 242
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 243 RAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 422
+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 423 VRKEAESCDCLQGFQLTH 476
+RK A+ C LQGF + H
Sbjct: 540 IRKLADQCSGLQGFLVFH 557
Score = 101 bits (242), Expect = 4e-22
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Frame = +3
Query: 111 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQVRAPRILVDLEPGTM 284
+G WE+ EHGI P G D + + N +++E G+ + DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 285 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 464
D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK A+ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 465 QLTH 476
+ H
Sbjct: 121 LIFH 124
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 118 bits (283), Expect = 4e-27
Identities = 54/138 (39%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 242
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 243 RAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 422
+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 423 VRKEAESCDCLQGFQLTH 476
+RK A+ C LQGF + H
Sbjct: 926 IRKLADQCTGLQGFLIFH 943
Score = 117 bits (282), Expect = 6e-27
Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQV 242
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E G+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 243 RAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 422
+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 423 VRKEAESCDCLQGFQLTH 476
+RK A+ C LQGF + H
Sbjct: 493 LRKLADGCTGLQGFLIFH 510
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 92.3 bits (219), Expect = 2e-19
Identities = 52/139 (37%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 239
MRE + I GQ G QIG WE+ EHGI P G D + N +++E G+
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 240 VRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 419
+ VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 420 VVRKEAESCDCLQGFQLTH 476
+RK A+ C LQGF + H
Sbjct: 111 RLRKLADQCSGLQGFFIFH 129
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 87.0 bits (206), Expect = 9e-18
Identities = 37/93 (39%), Positives = 56/93 (60%)
Frame = +3
Query: 198 ERINVYYNEASGGQVRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 377
+ N ++ E G+ + VDLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 378 HYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 476
HYT G E +D LD +RK A+ C LQGF + H
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFH 104
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/86 (41%), Positives = 56/86 (65%)
Frame = +3
Query: 219 NEASGGQVRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 398
+EA+ G+ +LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 399 LVDSVLDVVRKEAESCDCLQGFQLTH 476
+V+ V+D +RK + C LQGF + H
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFH 1050
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/64 (50%), Positives = 44/64 (68%)
Frame = +3
Query: 285 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 464
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 465 QLTH 476
+ H
Sbjct: 73 LIFH 76
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 73.7 bits (173), Expect = 9e-14
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +3
Query: 291 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 470
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 471 TH 476
H
Sbjct: 63 FH 64
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 70.5 bits (165), Expect = 8e-13
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +3
Query: 345 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 476
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ+ H
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAH 45
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 68.1 bits (159), Expect = 4e-12
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +3
Query: 291 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 470
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 471 TH 476
H
Sbjct: 63 FH 64
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 65.3 bits (152), Expect = 3e-11
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Frame = +3
Query: 75 IVHIQAGQCGNQIGAKFWEIISDE------HGIDPTGAYHGDSDLQLERINVYYNEASGG 236
IV +Q GQCGNQIG + +++I ++ + ++ + E + ++ +
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 237 QVRAPRILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 407
+ A + +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 408 SVLDVVRKEAESCDCLQGF 464
VLD+V++E E CD L GF
Sbjct: 123 KVLDLVQREVEKCDRLDGF 141
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 291 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 431
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGQ 239
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GG+
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 240 VRAPRILVDLEPGTMDSVR 296
+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 291 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 431
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 123 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 224
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 233
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 234 GQ 239
G+
Sbjct: 254 GK 255
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 43.6 bits (98), Expect = 1e-04
Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 7/138 (5%)
Frame = +3
Query: 84 IQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPRILV 263
+ GQCGNQIG + ++ + P H D G++R + V
Sbjct: 6 LPVGQCGNQIGHELMTLVEKQCEGKPLS--HRD-----------------GKLRC--VCV 44
Query: 264 DLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDV 422
D E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 45 DSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDA 103
Query: 423 VRKEAESCDCLQGFQLTH 476
+RKE E CD G + H
Sbjct: 104 MRKEVERCDSFAGTIVMH 121
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 192 QLERINVYYNEASGGQVRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 368
+L+ I V ++ ++A +L+D+E G ++++ GP +F + SG GNNW
Sbjct: 57 RLKDIPVGNSKGKIKSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 34.3 bits (75), Expect = 0.067
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 423 VRKEAESCDCLQGFQLTH 476
+RKEAE CD +QGFQL H
Sbjct: 1 MRKEAEDCDAIQGFQLLH 18
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 33.1 bits (72), Expect = 0.15
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -1
Query: 461 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGXGLSEDEVVRTEDLSERSRADRVH 282
S++A R R +S V I +L V++L PV+ G +++D V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 281 GAGL 270
G+
Sbjct: 264 RCGI 267
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 442 DSASFRTTSKTESTSSAPSV*CPLAQL 362
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 379 CPLAQLLPAPDCPKTKLSGRKICP 308
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 379 CPLAQLLPAPDCPKTKLSGRKICP 308
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 379 CPLAQLLPAPDCPKTKLSGRKICP 308
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.5 bits (58), Expect = 7.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 379 CPLAQLLPAPDCPKTKLSGRKICP 308
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 7.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 379 CPLAQLLPAPDCPKTKLSGRKICP 308
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.5 bits (58), Expect = 7.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 379 CPLAQLLPAPDCPKTKLSGRKICP 308
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.5 bits (58), Expect = 7.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 379 CPLAQLLPAPDCPKTKLSGRKICP 308
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.5 bits (58), Expect = 7.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 379 CPLAQLLPAPDCPKTKLSGRKICP 308
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 355 APDCPKTKLSGRKICPKGPERTESMVPGSKST 260
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_59549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2631
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 306 KVQSGQSPWCR-APSRRGCAGHVLARRRLHCSIH*CAPTASQSPH 175
+VQ PW R APSR+ + + +R + + C S +PH
Sbjct: 2483 RVQESPRPWKRSAPSRQVLSSPLFSRHNIRDDLESCWSRDSDTPH 2527
>SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7)
Length = 300
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 180 DSDLQLERINVYYNEASGGQVRAPRILVDLEPGTMDSV 293
D+D ++ + VYYN +S G++ + LVD P + V
Sbjct: 7 DNDYYMQCLTVYYNGSSAGEILC-KSLVDKIPDALQRV 43
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -1
Query: 455 EAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGXGLSEDEVVRTEDLSERSRADR 288
E T R S ++ ++ELS ++ + + A G S DE+ R D + + +R
Sbjct: 589 EEATTLRVQSQELRASLEELSQVKTKEINTLRAELGKSRDEIARKNDREKNALRER 644
>SB_37204| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-25)
Length = 455
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +2
Query: 140 RRARHRPHRCLPWGL*LAVGAHQCILQ*SLRRASTCPAHPRRLGARHH 283
+R + R ++C G+ ++ H C + + C A+PR L H
Sbjct: 186 KRKKQRVNKCKKCGVHVSGSKHSCSMPFQCKDCDMCFAYPRELIEHSH 233
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 221 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 120
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,427,142
Number of Sequences: 59808
Number of extensions: 347096
Number of successful extensions: 997
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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