Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0200
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g02870.1 68418.m00230 60S ribosomal protein L4/L1 (RPL4D) 60S... 118 3e-27
At3g09630.1 68416.m01142 60S ribosomal protein L4/L1 (RPL4A) str... 118 3e-27
At4g08960.1 68417.m01476 phosphotyrosyl phosphatase activator (P... 33 0.11
At5g17650.1 68418.m02069 glycine/proline-rich protein glycine/pr... 31 0.58
At1g57750.1 68414.m06552 cytochrome P450, putative similar to cy... 29 1.8
At1g26400.1 68414.m03220 FAD-binding domain-containing protein s... 29 1.8
At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1 GI... 29 2.4
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 29 2.4
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 29 2.4
At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family... 29 2.4
At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to S... 29 2.4
At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to S... 29 2.4
At3g28720.1 68416.m03586 expressed protein 29 3.1
At4g39480.1 68417.m05585 cytochrome P450 family protein contains... 28 4.1
At3g23670.1 68416.m02976 phragmoplast-associated kinesin-related... 27 7.2
At5g42390.1 68418.m05161 metalloendopeptidase identical to chlor... 27 9.5
At5g05340.1 68418.m00575 peroxidase, putative similar to peroxid... 27 9.5
At3g05650.1 68416.m00629 disease resistance family protein conta... 27 9.5
At2g05520.1 68415.m00584 glycine-rich protein (GRP) identical to... 27 9.5
At1g76010.1 68414.m08825 expressed protein 27 9.5
At1g03050.1 68414.m00277 epsin N-terminal homology (ENTH) domain... 27 9.5
>At5g02870.1 68418.m00230 60S ribosomal protein L4/L1 (RPL4D) 60S
roibosomal protein L4, Arabidopsis thaliana,
EMBL:CAA79104
Length = 407
Score = 118 bits (284), Expect = 3e-27
Identities = 55/91 (60%), Positives = 57/91 (62%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
QTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 QTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMK 126
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
ARGH IE P P
Sbjct: 127 RHAIVSAIAATAVPALVMARGHKIENVPEMP 157
Score = 55.6 bits (128), Expect = 2e-08
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +1
Query: 76 SVARPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVRRR 246
+ ARPLV+V + T Q LP V AP+RPD+VN VH +S NSRQPY V ++
Sbjct: 5 AAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 511 IPELPLVVAEKVQEINKTKQAV 576
+PE+PLVV++ + + KT A+
Sbjct: 153 VPEMPLVVSDSAEAVEKTSAAI 174
>At3g09630.1 68416.m01142 60S ribosomal protein L4/L1 (RPL4A) strong
similarity to 60S ribosomal protein L1 GB:P49691
Length = 406
Score = 118 bits (284), Expect = 3e-27
Identities = 55/91 (60%), Positives = 57/91 (62%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
QTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPTK WRRWH
Sbjct: 66 QTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMK 125
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
ARGH IE P P
Sbjct: 126 RHAIVSAIAATAVPALVMARGHKIENVPEMP 156
Score = 57.6 bits (133), Expect = 6e-09
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +1
Query: 67 MSLSVARPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVR 240
M+ + ARPLV++ + + T Q + LP V AP+RPD+VN VH +S NSRQPY V
Sbjct: 1 MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60
Query: 241 RR 246
++
Sbjct: 61 KK 62
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 511 IPELPLVVAEKVQEINKTKQAV 576
+PE+PLVV++ + + KT A+
Sbjct: 152 VPEMPLVVSDSAEAVEKTSAAI 173
>At4g08960.1 68417.m01476 phosphotyrosyl phosphatase activator
(PTPA) family protein similar to Protein phosphatase 2A,
regulatory subunit B' (PP2A, subunit B', PR53 isoform)
(Phosphotyrosyl phosphatase activator) (PTPA)
(Swiss-Prot:Q28717) [Oryctolagus cuniculus]
Length = 392
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = -2
Query: 351 PKAP*PDLWVPPPRTRGIRATARPVPHDSALVCDQPPSHAVGLPRV 214
P A P++ PPP R IRA A +PH+S + P HA +P V
Sbjct: 46 PLASFPEM-SPPPNYRPIRAPAINLPHNSQAIILSPVPHAEQVPVV 90
>At5g17650.1 68418.m02069 glycine/proline-rich protein
glycine/proline-rich protein GPRP - Arabidopsis
thaliana, EMBL:X84315
Length = 173
Score = 31.1 bits (67), Expect = 0.58
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 368 HHDTCYRRHPDRTYGYHHHGHAEF 297
HH Y H YGY +HGH +F
Sbjct: 122 HHHGHYGHHHGHGYGYGYHGHGKF 145
>At1g57750.1 68414.m06552 cytochrome P450, putative similar to
cytochrome P450 GI:4688670 from [Catharanthus roseus]
Length = 497
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 91 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 237
LV +++ SE+++ PLPF K+P +PD++ H + NS+ C+
Sbjct: 351 LVYLHAALSESMR-LYPPLPFNHKSPAKPDVLPSGH-KVDANSKIVICI 397
>At1g26400.1 68414.m03220 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 527
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 569 CLVLLISWTFSATTKGSSGIFQ*CV 495
CLVLL+S +A TK SGIF C+
Sbjct: 9 CLVLLVSILRAAVTKPDSGIFTGCL 33
>At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1
GI:5566292 from [Drosophila melanogaster]; contains
prosite evidence: PS00383: Tyrosine specific protein
phosphatases active site
Length = 632
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 526 REARESFNNVSSSLNERWDASSSNGCCQGRSPLSEVDATVPAPPG 392
REA E + +S+ + D + G PLS+ D VP PPG
Sbjct: 42 REAHEDSISTEASV-AKVDDTQMPASSTGSEPLSKTDDIVPCPPG 85
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 364 WWTYVRPHEALAALAPSRQPPTAESGLGSSRCC 462
WW +V LA+ APS P + L SR C
Sbjct: 465 WWNWVDRQNPLASPAPSYSQPQRDFRLTPSRLC 497
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 364 WWTYVRPHEALAALAPSRQPPTAESGLGSSRCC 462
WW +V LA+ APS P + L SR C
Sbjct: 464 WWNWVDRQNPLASPAPSYSQPQRDFRLTPSRLC 496
>At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 340
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/86 (24%), Positives = 32/86 (37%)
Frame = -2
Query: 393 GFVGANIRPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALVCDQPPSHAVGLPRV 214
GFV + P H +P L PPP++ + + P P S+ +P VG
Sbjct: 174 GFVAPMMAQPMHQIPTTIVLSLPPPPPQSLSLSLPSPPQPPPSSSFHAEPIPPTVGTSST 233
Query: 213 LGHRNVNIIDQVRTYGRLEYEREGLG 136
R + G E E + +G
Sbjct: 234 KRRRTTP--GETTAGGEREVEEDAVG 257
>At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to
SP|O04379 Argonaute protein (AGO1) {Arabidopsis
thaliana}; contains Pfam profiles PF02171: Piwi domain,
PF02170: PAZ domain
Length = 1050
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 212 RTRGSPTA*EGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 373
RT EG S+ + G GR R +GGG H+ G+G +GGR
Sbjct: 6 RTDAPSEGGEGSGSREAGPVSGGGRGSQRGGFQQGGGQHQGGRGYTPQPQQGGR 59
>At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to
SP|O04379 Argonaute protein (AGO1) {Arabidopsis
thaliana}; contains Pfam profiles PF02171: Piwi domain,
PF02170: PAZ domain
Length = 1048
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 212 RTRGSPTA*EGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 373
RT EG S+ + G GR R +GGG H+ G+G +GGR
Sbjct: 6 RTDAPSEGGEGSGSREAGPVSGGGRGSQRGGFQQGGGQHQGGRGYTPQPQQGGR 59
>At3g28720.1 68416.m03586 expressed protein
Length = 687
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -1
Query: 541 FRLQPREARESFNNVSSSLNERWDASSSNGCCQGRSPLS 425
+RL P+ + +SF ++SSSL +SS + +S LS
Sbjct: 45 YRLDPKSSNDSFTSLSSSLKRSLSSSSIHFSSLSKSLLS 83
>At4g39480.1 68417.m05585 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 989
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 142 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 237
P+PF K+P +PD++ H + NSR +C+
Sbjct: 384 PVPFNHKSPAKPDVLPSGH-KVKANSRILFCL 414
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 142 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 237
P+PF K+P +PD++ H + NS+ +C+
Sbjct: 857 PVPFQHKSPTKPDVLPSGH-KVDANSKILFCL 887
>At3g23670.1 68416.m02976 phragmoplast-associated kinesin-related
protein, putative similar to kinesin like protein
GB:CAB10194 from [Arabidopsis thaliana]
Length = 1313
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 514 ESFNNVSSSLNERWDASSSNGCCQGRSPLSEVD 416
ES+NN +E D + + CCQ + SE D
Sbjct: 557 ESYNNSHLKSSEATDVNMEDACCQTENNGSETD 589
>At5g42390.1 68418.m05161 metalloendopeptidase identical to
chloroplast processing enzyme metalloendopeptidase
[Arabidopsis thaliana] gi|2827039|gb|AAC39482
Length = 1265
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 405 GTVASTSDSGERPWQQPLLLLASQRSFRLEDTLLKDS 515
GTV ++ DS + P +P+L + + LKD+
Sbjct: 969 GTVKASHDSAKPPGSEPILFRQPTAGLQFQQVFLKDT 1005
>At5g05340.1 68418.m00575 peroxidase, putative similar to peroxidase
[Nicotiana tabacum] gi|5381253|dbj|BAA82306; similar to
Peroxidase P7 [Brassica rapa (Turnip)] SWISS-PROT:P00434
Length = 324
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 66 NESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 203
N +I +PT S+ G S V + GAHT G + C+ F
Sbjct: 163 NSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSR-CTNF 207
>At3g05650.1 68416.m00629 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-4A protein
[Lycopersicon esculentum] gi|3097197|emb|CAA73187
Length = 868
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 424 PTAESGLGSSRCCYW 468
PT ES +S CCYW
Sbjct: 66 PTTESWANNSDCCYW 80
>At2g05520.1 68415.m00584 glycine-rich protein (GRP) identical to
glycine-rich protein; atGRP (GI:259447) [Arabidopsis
thaliana]
Length = 145
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 275 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 370
G GR R +GGG + G G+ G+ CR G
Sbjct: 88 GGGRYQGGGGRYQGGGGRQGGGGSGGSYCRHG 119
>At1g76010.1 68414.m08825 expressed protein
Length = 350
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +2
Query: 227 PTA*EGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 367
P+ GG+ + G GR R R RGGG R G G F N G
Sbjct: 301 PSQGRGGYD--GPQGRGRGRGRGRGGRGRGGG--RGGDGGFNNRSDG 343
>At1g03050.1 68414.m00277 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to CLATHRIN
COAT ASSEMBLY PROTEIN AP180 - Mus musculus,
SWISSPROT:Q61548
Length = 599
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 130 PAPSHSSLNTPTLKVGLPIDSFRYFSEAIPPKY 32
PAPS ++ N + +P+D F E PP Y
Sbjct: 519 PAPSTANGNAGNINSPVPMDPFAASLEVAPPAY 551
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,592,473
Number of Sequences: 28952
Number of extensions: 267677
Number of successful extensions: 1029
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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