Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0199
         (349 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z94057-1|CAI21650.1| 1358|Homo sapiens tenascin R (restrictin, j...    29   3.0  
Z94055-1|CAI19943.1| 1358|Homo sapiens tenascin R (restrictin, j...    29   3.0  
Z67996-1|CAA91947.1| 1358|Homo sapiens tenascin-R (restrictin) p...    29   3.0  
X98085-1|CAA66709.1| 1358|Homo sapiens tenascin-R protein.             29   3.0  
BC129830-1|AAI29831.1| 1257|Homo sapiens TNR protein protein.          29   3.0  
AK123403-1|BAC85607.1|  243|Homo sapiens protein ( Homo sapiens ...    29   3.0  
BC029819-1|AAH29819.1|  483|Homo sapiens dual oxidase maturation...    29   5.3  

>Z94057-1|CAI21650.1| 1358|Homo sapiens tenascin R (restrictin,
            janusin) protein.
          Length = 1358

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 224  NLVAGSIVSQ*LLLPW*PPRHEVMLNITRYRIAPGS 331
            NL A  +  Q  L+ W PPR E+   +  Y+   GS
Sbjct: 1046 NLTASEVTRQSALISWQPPRAEIENYVLTYKSTDGS 1081


>Z94055-1|CAI19943.1| 1358|Homo sapiens tenascin R (restrictin,
            janusin) protein.
          Length = 1358

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 224  NLVAGSIVSQ*LLLPW*PPRHEVMLNITRYRIAPGS 331
            NL A  +  Q  L+ W PPR E+   +  Y+   GS
Sbjct: 1046 NLTASEVTRQSALISWQPPRAEIENYVLTYKSTDGS 1081


>Z67996-1|CAA91947.1| 1358|Homo sapiens tenascin-R (restrictin)
            protein.
          Length = 1358

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 224  NLVAGSIVSQ*LLLPW*PPRHEVMLNITRYRIAPGS 331
            NL A  +  Q  L+ W PPR E+   +  Y+   GS
Sbjct: 1046 NLTASEVTRQSALISWQPPRAEIENYVLTYKSTDGS 1081


>X98085-1|CAA66709.1| 1358|Homo sapiens tenascin-R protein.
          Length = 1358

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 224  NLVAGSIVSQ*LLLPW*PPRHEVMLNITRYRIAPGS 331
            NL A  +  Q  L+ W PPR E+   +  Y+   GS
Sbjct: 1046 NLTASEVTRQSALISWQPPRAEIENYVLTYKSTDGS 1081


>BC129830-1|AAI29831.1| 1257|Homo sapiens TNR protein protein.
          Length = 1257

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 224  NLVAGSIVSQ*LLLPW*PPRHEVMLNITRYRIAPGS 331
            NL A  +  Q  L+ W PPR E+   +  Y+   GS
Sbjct: 945  NLTASEVTRQSALISWQPPRAEIENYVLTYKSTDGS 980


>AK123403-1|BAC85607.1|  243|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41409 fis, clone BRHIP2000920. ).
          Length = 243

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 124 WGSVDSISGSRAPFQLSGHSGTNHSRCC 207
           WG VDS+ G     Q +GHSG +H+  C
Sbjct: 160 WG-VDSLGGCPRASQPAGHSGLHHTLTC 186


>BC029819-1|AAH29819.1|  483|Homo sapiens dual oxidase maturation
           factor 1 protein.
          Length = 483

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 46  EQKLKEHGASSCISGKRGRRCGNIWHWGSVD-SISGSRAPF-QLSGHSGTNHSRC 204
           E++  EH   S     RGR  G +W WGS +    G RA   +L  +SG     C
Sbjct: 396 EERWAEHTGDSP-RPLRGRGTGRLWRWGSKERRACGVRAMLPRLVSNSGLKRPSC 449


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,120,939
Number of Sequences: 237096
Number of extensions: 850195
Number of successful extensions: 1643
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)