BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0199 (349 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY060809-1|AAL28357.1| 1272|Drosophila melanogaster GH27809p pro... 29 2.1 AE013599-3941|AAF47260.2| 1272|Drosophila melanogaster CG30421-P... 29 2.1 AY118487-1|AAM49856.1| 870|Drosophila melanogaster LD01372p pro... 28 2.8 AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA... 28 2.8 AE014296-1111|AAN12093.2| 410|Drosophila melanogaster CG32403-P... 28 2.8 >AY060809-1|AAL28357.1| 1272|Drosophila melanogaster GH27809p protein. Length = 1272 Score = 28.7 bits (61), Expect = 2.1 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +1 Query: 43 REQKLKEHGASSCISGKRGRRCGNIWHWGSVDSISGSRAPFQLSGHSGT 189 RE++ SSC+ G RGR GS+ S+S APF S ++ T Sbjct: 103 RERRGSHTAISSCVGGGRGRS-------GSIVSLSSYEAPFISSTNNNT 144 >AE013599-3941|AAF47260.2| 1272|Drosophila melanogaster CG30421-PA protein. Length = 1272 Score = 28.7 bits (61), Expect = 2.1 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +1 Query: 43 REQKLKEHGASSCISGKRGRRCGNIWHWGSVDSISGSRAPFQLSGHSGT 189 RE++ SSC+ G RGR GS+ S+S APF S ++ T Sbjct: 103 RERRGSHTAISSCVGGGRGRS-------GSIVSLSSYEAPFISSTNNNT 144 >AY118487-1|AAM49856.1| 870|Drosophila melanogaster LD01372p protein. Length = 870 Score = 28.3 bits (60), Expect = 2.8 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +1 Query: 169 LSGHSGTNHSRCCTSILREFSGRQH 243 LSG S + HSR T++LR+ S +QH Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212 >AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA protein. Length = 2139 Score = 28.3 bits (60), Expect = 2.8 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +1 Query: 169 LSGHSGTNHSRCCTSILREFSGRQH 243 LSG S + HSR T++LR+ S +QH Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212 >AE014296-1111|AAN12093.2| 410|Drosophila melanogaster CG32403-PA protein. Length = 410 Score = 28.3 bits (60), Expect = 2.8 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -1 Query: 148 H*WSQQTPSAIYYRTADRVY 89 H W+Q+ P A+ YRTA R Y Sbjct: 127 HPWAQKGPGAVDYRTAKRWY 146 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,923,292 Number of Sequences: 53049 Number of extensions: 264950 Number of successful extensions: 498 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 494 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 498 length of database: 24,988,368 effective HSP length: 76 effective length of database: 20,956,644 effective search space used: 817309116 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -