BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0199
(349 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060809-1|AAL28357.1| 1272|Drosophila melanogaster GH27809p pro... 29 2.1
AE013599-3941|AAF47260.2| 1272|Drosophila melanogaster CG30421-P... 29 2.1
AY118487-1|AAM49856.1| 870|Drosophila melanogaster LD01372p pro... 28 2.8
AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA... 28 2.8
AE014296-1111|AAN12093.2| 410|Drosophila melanogaster CG32403-P... 28 2.8
>AY060809-1|AAL28357.1| 1272|Drosophila melanogaster GH27809p
protein.
Length = 1272
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 43 REQKLKEHGASSCISGKRGRRCGNIWHWGSVDSISGSRAPFQLSGHSGT 189
RE++ SSC+ G RGR GS+ S+S APF S ++ T
Sbjct: 103 RERRGSHTAISSCVGGGRGRS-------GSIVSLSSYEAPFISSTNNNT 144
>AE013599-3941|AAF47260.2| 1272|Drosophila melanogaster CG30421-PA
protein.
Length = 1272
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 43 REQKLKEHGASSCISGKRGRRCGNIWHWGSVDSISGSRAPFQLSGHSGT 189
RE++ SSC+ G RGR GS+ S+S APF S ++ T
Sbjct: 103 RERRGSHTAISSCVGGGRGRS-------GSIVSLSSYEAPFISSTNNNT 144
>AY118487-1|AAM49856.1| 870|Drosophila melanogaster LD01372p
protein.
Length = 870
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 169 LSGHSGTNHSRCCTSILREFSGRQH 243
LSG S + HSR T++LR+ S +QH
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212
>AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA
protein.
Length = 2139
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 169 LSGHSGTNHSRCCTSILREFSGRQH 243
LSG S + HSR T++LR+ S +QH
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212
>AE014296-1111|AAN12093.2| 410|Drosophila melanogaster CG32403-PA
protein.
Length = 410
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 148 H*WSQQTPSAIYYRTADRVY 89
H W+Q+ P A+ YRTA R Y
Sbjct: 127 HPWAQKGPGAVDYRTAKRWY 146
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,923,292
Number of Sequences: 53049
Number of extensions: 264950
Number of successful extensions: 498
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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