Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0199
         (349 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              21   4.2  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   5.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   9.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   9.6  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 80  QLEAPCSFNFCSLRAIRRY 24
           + +   SF  C L+A+R Y
Sbjct: 131 ECDVALSFKLCMLKAMRNY 149


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 249 HSDCCCHGSPHAMR*C*TSPVIASLQ 326
           H       +P  ++ C TSP  ASL+
Sbjct: 15  HQQLFSSANPGTIQACTTSPATASLE 40


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 224  NLVAGSIVSQ*LLLPW*PPRHEV 292
            NL A ++ S  +L+ W PP  E+
Sbjct: 1012 NLEARALSSSEILITWSPPLPEL 1034


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 224  NLVAGSIVSQ*LLLPW*PPRHEV 292
            NL A ++ S  +L+ W PP  E+
Sbjct: 1008 NLEARALSSSEILITWSPPLPEL 1030


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -1

Query: 100 DRVYH*CS*KPHVPLIFVLFER 35
           + +Y+ C  +P++ + FV+  R
Sbjct: 207 NEIYYNCCPEPYIDITFVVIIR 228


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 164 NGAREPLMESTDPQCHILPHRRPRLPLMQLEAPCSF 57
           +GA + L   TDP     P R+  L L +  +   F
Sbjct: 707 SGALDRLHYETDPCVRYYPRRKEWLYLHRARSESEF 742


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,085
Number of Sequences: 438
Number of extensions: 1628
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)