Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0199
         (349 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g15840.1 68417.m02409 expressed protein                             31   0.21 
At2g21300.1 68415.m02535 kinesin motor family protein contains P...    27   2.6  
At5g49470.2 68418.m06121 protein kinase family protein contains ...    26   7.9  
At5g49470.1 68418.m06122 protein kinase family protein contains ...    26   7.9  
At4g27370.1 68417.m03929 myosin family protein contains Pfam pro...    26   7.9  
At4g03610.1 68417.m00496 phosphonate metabolism protein-related ...    26   7.9  

>At4g15840.1 68417.m02409 expressed protein
          Length = 660

 Score = 31.1 bits (67), Expect = 0.21
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 142 ISGSRAPFQLSGHSGTNHSRCCTSILREFSG 234
           +SGS   FQ S +S TN  R CTS++ +  G
Sbjct: 115 VSGSNLVFQQSSNSQTNFGRPCTSVVDKTEG 145


>At2g21300.1 68415.m02535 kinesin motor family protein contains Pfam
           profile: kinesin motor domain PF00225
          Length = 862

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +1

Query: 52  KLKEHGASSCISGKRGRRCGNIWHWGSVDSISGSRAPFQLS 174
           K+ EH ASS       R   N W  GSV  ISG   P + S
Sbjct: 425 KMVEHDASSKAGTPHFRNRTNKWEDGSVSEISGVVDPDRTS 465


>At5g49470.2 68418.m06121 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 834

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 88  GKRGRRCGNIWHWGSVDSISGSRAPFQL-SGHSGTNHSRCCTSI 216
           G  GRR  ++W W  V +    +  +Q  S HS  + S+ C SI
Sbjct: 397 GLEGRRSHSVWPW--VRNEQQKQQAYQSNSNHSVKSESQACESI 438


>At5g49470.1 68418.m06122 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 483

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 88  GKRGRRCGNIWHWGSVDSISGSRAPFQL-SGHSGTNHSRCCTSI 216
           G  GRR  ++W W  V +    +  +Q  S HS  + S+ C SI
Sbjct: 110 GLEGRRSHSVWPW--VRNEQQKQQAYQSNSNHSVKSESQACESI 151


>At4g27370.1 68417.m03929 myosin family protein contains Pfam
           profiles: PF00063 myosin head (motor domain), PF00612 IQ
           calmodulin-binding motif
          Length = 1126

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 11/18 (61%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = +1

Query: 52  KLKEH-GASSCISGKRGR 102
           KLK+H  A+SC  G+RGR
Sbjct: 610 KLKQHLNANSCFKGERGR 627


>At4g03610.1 68417.m00496 phosphonate metabolism protein-related
           weak similarity to PhnP protein. (Swiss-Prot:P16692)
           [Escherichia coli]
          Length = 290

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
 Frame = -3

Query: 146 LMESTDPQCHILPHRRPRLPLMQLEAPCS----FNFCSLRAIRRYKSYYVD 6
           L++ +DP CH+       LP +     C+     ++CS     R+K   +D
Sbjct: 30  LLQPSDPPCHVCSQSLSLLPHLNPNYRCNTSLLIDYCSKEEDGRHKYILID 80


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,912,382
Number of Sequences: 28952
Number of extensions: 115002
Number of successful extensions: 211
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 429398688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)