Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0197
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   0.76 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.3  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    21   5.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   5.4  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   5.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.4  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -1

Query: 353 VYYLNRIVKWKIIEG*IFYFVSILI 279
           V Y NRI  W I+ G IF     LI
Sbjct: 148 VIYFNRIFGWNILFGHIFTVCRTLI 172


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 408 DMLQIGNIVNIFSNYYISRXR 470
           DML +GN+  I   ++  R R
Sbjct: 637 DMLSVGNMTLILDKFFFPRWR 657


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 262 KLYYQSSRIPLLSISTCLC*VIKVCNV 182
           +LY+ S   P+LS  T +  V+ VC+V
Sbjct: 553 ELYFMSLLNPILSNVTFVIDVVYVCDV 579


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 262 KLYYQSSRIPLLSISTCLC*VIKVCNV 182
           +LY+ S   P+LS  T +  V+ VC+V
Sbjct: 278 ELYFMSLLNPILSNVTFVIDVVYVCDV 304


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = +3

Query: 435 NIFSNYYISRXRSCYTENAFQNVQVICLIKXIAPSEH 545
           N   N  +   R C      + VQ++ L++ I P  +
Sbjct: 24  NSILNIALKNFRLCKKHKTKKPVQILALLQEIIPKSY 60


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = +3

Query: 435 NIFSNYYISRXRSCYTENAFQNVQVICLIKXIAPSEH 545
           N   N  +   R C      + VQ++ L++ I P  +
Sbjct: 24  NSILNIALKNFRLCKKHKTKKPVQILALLQEIIPKSY 60


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -1

Query: 158 NYYY*NTCKIS*KNMRLFL*SVLLAHNLLIKETNSL 51
           N Y    CK++  + + FL  V + HN ++   N +
Sbjct: 199 NQYIKQVCKLNNGHYKNFLSQVEIIHNEILVTHNEI 234


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -1

Query: 158 NYYY*NTCKIS*KNMRLFL*SVLLAHNLLIKETNSL 51
           N Y    CK++  + + FL  V + HN ++   N +
Sbjct: 24  NQYIKQVCKLNNGHYKNFLSQVEIIHNEILVTHNEI 59


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 132 NFVKKYAFIFVVCFISTQSSHQRNEFSVMN 43
           NFV +Y     V +I + +   RN+ S +N
Sbjct: 166 NFVNEYVQAIEVLYICSYTVLIRNKISNLN 195


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,367
Number of Sequences: 336
Number of extensions: 2424
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)