Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0197
         (548 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1450 + 30246702-30247346,30248603-30248689,30248789-302489...    28   5.6  
12_01_0718 + 6339982-6342981                                           27   9.9  

>06_03_1450 +
           30246702-30247346,30248603-30248689,30248789-30248920,
           30249016-30249162,30250375-30250440,30250519-30250629,
           30251551-30251584,30251667-30251743,30251829-30251906
          Length = 458

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 359 LRVYYLNRIVKWKIIEG*IFYFVSILIIHFTQETI-LSK*SYT 234
           LR+Y L  + +W +++  IF F S   + F    I L   SYT
Sbjct: 232 LRIYPLETVTRWDVLDSSIFAFWSKSSVDFEARRIRLKSNSYT 274


>12_01_0718 + 6339982-6342981
          Length = 999

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 21/80 (26%), Positives = 37/80 (46%)
 Frame = +3

Query: 279 DEDADEIKDLTLNYFPFDNSVQIIDAKKGKNVLKRVQLPPLNLDMLQIGNIVNIFSNYYI 458
           D   ++   + LN+  +     I   K  KN L    +PPL  D ++   ++++ +NY  
Sbjct: 593 DYSNNQFSSMPLNFSTYLKKTIIF--KASKNNLSG-NIPPLICDGIKSLQLIDLSNNYLT 649

Query: 459 SRXRSCYTENAFQNVQVICL 518
               SC  E+A   +QV+ L
Sbjct: 650 GIIPSCLMEDA-SALQVLSL 668


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,362,866
Number of Sequences: 37544
Number of extensions: 174189
Number of successful extensions: 300
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)