Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0191
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    25   0.50 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   4.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   8.1  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 261 NPGDVFIGKYYTEFDAG 211
           +P DVFI K+ T F++G
Sbjct: 106 DPDDVFIRKFETSFESG 122


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 313 ACPASWRWTCRS 278
           A   +WRW C+S
Sbjct: 20  ALNGAWRWECKS 31


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 187 GREPELAVSRVELRVVLADEHVPRIHSGAMGFGTSSAMKPD 309
           G+E  L ++     V  + + V  IHSGA   G  S  +PD
Sbjct: 94  GQENCLYLTIYTTHVNASFDVVVYIHSGAFMTGYGSFYQPD 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,085
Number of Sequences: 336
Number of extensions: 1916
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)