Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0191
(499 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g11910.1 68414.m01374 aspartyl protease family protein contai... 41 5e-04
At1g62290.1 68414.m07027 aspartyl protease family protein contai... 40 0.001
At4g04460.1 68417.m00648 aspartyl protease family protein contai... 34 0.061
At2g43410.1 68415.m05395 RNA recognition motif (RRM)-containing ... 31 0.33
At3g55270.1 68416.m06138 MAP kinase phosphatase (MKP1) identical... 29 1.7
At4g12420.1 68417.m01964 multi-copper oxidase, putative (SKU5) i... 28 4.0
At5g58600.1 68418.m07343 expressed protein various predicted pro... 27 5.3
At5g37540.1 68418.m04521 aspartyl protease family protein weak s... 27 5.3
At1g66180.1 68414.m07512 aspartyl protease family protein contai... 27 5.3
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 27 5.3
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 27 5.3
At5g19580.1 68418.m02331 glyoxal oxidase-related contains simila... 27 7.0
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 27 7.0
At1g26150.1 68414.m03192 protein kinase family protein similar t... 27 9.3
At1g20570.1 68414.m02565 tubulin family protein 27 9.3
>At1g11910.1 68414.m01374 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 506
Score = 40.7 bits (91), Expect = 5e-04
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -2
Query: 285 AEAHGPAVNPGDVFIGKYYTEFDAGNRQLGF 193
A GP GDVF+GKY+T FD GN Q+GF
Sbjct: 472 APPRGPLWILGDVFMGKYHTVFDFGNEQVGF 502
Score = 33.5 bits (73), Expect = 0.081
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 445 GQYVVDCSXIPHLPRVTFTIAGKRLHARGQRYVLRXG 335
G+ VDC+ + +P V+ TI GK + YVL+ G
Sbjct: 419 GESAVDCAQLSTMPTVSLTIGGKVFDLAPEEYVLKVG 455
Score = 30.3 bits (65), Expect = 0.75
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 314 CLSGFMALDVPKPMAPL*IL 255
C+SGF+ALDV P PL IL
Sbjct: 462 CISGFIALDVAPPRGPLWIL 481
>At1g62290.1 68414.m07027 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 513
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -2
Query: 273 GPAVNPGDVFIGKYYTEFDAGNRQLGF 193
GP GDVF+GKY+T FD GN Q+GF
Sbjct: 483 GPLWILGDVFMGKYHTVFDFGNEQVGF 509
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 445 GQYVVDCSXIPHLPRVTFTIAGKRLHARGQRYVLRXG 335
G+ VDCS + +P V+FTI GK + YVL+ G
Sbjct: 426 GESAVDCSQLSKMPTVSFTIGGKVFDLAPEEYVLKIG 462
Score = 32.3 bits (70), Expect = 0.19
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 314 CLSGFMALDVPKPMAPL*IL 255
C+SGF ALD+P P PL IL
Sbjct: 469 CISGFTALDIPPPRGPLWIL 488
>At4g04460.1 68417.m00648 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 508
Score = 33.9 bits (74), Expect = 0.061
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -1
Query: 442 QYVVDCSXIPHLPRVTFTIAGKRLHARGQRYVLRXGTIRGTRCACPASWRWTCRSPWPRC 263
Q VDC + +P VTF+I G+ Q Y+ + G G C + + +P PR
Sbjct: 422 QSAVDCGRVSSMPIVTFSIGGRSFDLTPQDYIFKIG--EGVESQCTSGFTAMDIAP-PRG 478
Query: 262 ESW 254
W
Sbjct: 479 PLW 481
Score = 33.1 bits (72), Expect = 0.11
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 285 AEAHGPAVNPGDVFIGKYYTEFDAGNRQLGF 193
A GP GD+F+G Y+T FD G ++GF
Sbjct: 474 APPRGPLWILGDIFMGPYHTVFDYGKGRVGF 504
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 314 CLSGFMALDVPKPMAPL*IL 255
C SGF A+D+ P PL IL
Sbjct: 464 CTSGFTAMDIAPPRGPLWIL 483
>At2g43410.1 68415.m05395 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 1056
Score = 31.5 bits (68), Expect = 0.33
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 188 GANPSWRFPASNSV*YLPMNTSPGFTAGPWASAR 289
G P+WR P++N LP T PG P R
Sbjct: 499 GKEPNWRRPSANGTGILPSPTGPGILPSPAQGTR 532
>At3g55270.1 68416.m06138 MAP kinase phosphatase (MKP1) identical to
MAP kinase phosphatase (MKP1) GI:13540262 from
[Arabidopsis thaliana]
Length = 534
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2
Query: 128 NQFN**KCLINASGRAAHTAGANPSWRFPASNSV*YLPMNTSPGFTAGPWASARPAP*SR 307
N N K +SGR++ PS P +S+ LP TSP + G +P+P +R
Sbjct: 267 NSGNSLKSFSQSSGRSSLRPSIPPSLTLPKFSSLSLLPSQTSPKESRGVNTFLQPSP-NR 325
Query: 308 TGTP 319
+P
Sbjct: 326 KASP 329
>At4g12420.1 68417.m01964 multi-copper oxidase, putative (SKU5)
identical to multi-copper oxidase-related protein
(SKU5)(GI:18158154) [Arabidopsis thaliana]; similar to
pollen-specific protein precursor - common tobacco,
PIR2:S22495; contains Pfam profile: PF00394 Multicopper
oxidase
Length = 587
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -1
Query: 382 GKRLHARG--QRYVLRXGTIRGTRCACPASWRWT 287
G LH G QR V + GT C P W WT
Sbjct: 76 GLLLHWNGIQQRRVSWQDGVLGTNCPIPPKWNWT 109
>At5g58600.1 68418.m07343 expressed protein various predicted
proteins, Arabidopsis thaliana and Oryza sativa
Length = 402
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +1
Query: 181 HGGREPELAVSRVELRVVLADEHVPRIHSGAMGFGTSSAMKPDRHTVCPELCXPG 345
HG P + L + D H P ++SG + S +PD+ C C PG
Sbjct: 336 HGMHNPAFLLDITLLSSLRKDGH-PSVYSGLIS--GSQRSRPDQSADCSHWCLPG 387
>At5g37540.1 68418.m04521 aspartyl protease family protein weak
similarity to CND41, chloroplast nucleoid DNA binding
protein [Nicotiana tabacum] GI:2541876; contains Prosite
PS00141: Eukaryotic and viral aspartyl proteases active
site; contains 1 predicted transmembrane domain
Length = 442
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 297 GAGRAEAHGPAVNP-GDVFIGKYYTEFDAGNRQLGF 193
G GR+ G A N G+V + EFD NR++GF
Sbjct: 398 GIGRSSMLGAASNIIGNVHQQNLWVEFDVTNRRVGF 433
>At1g66180.1 68414.m07512 aspartyl protease family protein contains
Pfam PF00026: Eukaryotic aspartyl protease profile;
similar to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]
Length = 430
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 297 GAGRAEAHGPAVNP-GDVFIGKYYTEFDAGNRQLGF 193
G GR+ G A N G+V + EFD NR++GF
Sbjct: 386 GIGRSSMLGAASNIIGNVHQQNLWVEFDVTNRRVGF 421
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 182 TAGANPSWRFPASNSV*YLPMNTSPGFTAGPWASARP 292
T NP R PA + Y P +++P TA P +S P
Sbjct: 1926 TPATNPGLRSPAPHLNSYRPSSSTPVATATPTSSVPP 1962
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 182 TAGANPSWRFPASNSV*YLPMNTSPGFTAGPWASARP 292
T NP R PA + Y P +++P TA P +S P
Sbjct: 1926 TPATNPGLRSPAPHLNSYRPSSSTPVATATPTSSVPP 1962
>At5g19580.1 68418.m02331 glyoxal oxidase-related contains
similarity to glyoxal oxidase precursor [Phanerochaete
chrysosporium] gi|1050302|gb|AAA87594
Length = 594
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/57 (22%), Positives = 23/57 (40%)
Frame = +2
Query: 329 NCAXPEHVSLPSSVKSFPGDGKSDSRQVRYXAAVHDVLPEAIGRCGHRRVXGFHLLG 499
N E LP +++PG G S ++ V+P + CG + ++ G
Sbjct: 288 NQVIKEFPQLPGGARNYPGSGSSALLPIQLYVKNPKVIPAEVLVCGGSKQDAYYKAG 344
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 258 DSQRGHGLRHVQRHEAGQAHRVPRIVPXR 344
D+ ++H+ A QA+R+PR+VP R
Sbjct: 337 DAVLSMAVKHLPDPIAAQAYRIPRLVPER 365
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 290 PAP*SRTGTPCAPNCAXPEHVSLPSSVKSFPGD 388
PA R +P+ A P ++LP SFPGD
Sbjct: 4 PAQAPREEVSLSPSLASPPLMALPPPQPSFPGD 36
>At1g20570.1 68414.m02565 tubulin family protein
Length = 976
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 449 LRAVRRGLQXHTAPAASHFYHRRETTSRSRATIRAPGWHNSGHTVCLSGFM 297
++ + + LQ ++P F+ R+E T R+++ IR S V L+GF+
Sbjct: 45 VKGLLQALQGFSSPFI--FWDRKEQTFRAKSEIRVSHLSQSSLHVLLAGFL 93
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,341,502
Number of Sequences: 28952
Number of extensions: 182080
Number of successful extensions: 473
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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