Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0189
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   1.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.6  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   6.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.1  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -3

Query: 284 YIYNVQHVVLQHWGKFRXEYVQGFPVKXTNRISTLSPIFFH 162
           YI++V + V ++       Y+  + V   N+IS L+    H
Sbjct: 160 YIFDVPNFVNEYVQAIEVLYICSYTVLIRNKISNLNTSLIH 200


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 281 IYNVQHVVLQHWGKFRXEY 225
           IYNV++  ++ W   R +Y
Sbjct: 325 IYNVEYKNVEFWRNIREDY 343


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +2

Query: 329 PYYFKYLRN 355
           PYY++YL+N
Sbjct: 40  PYYYQYLQN 48


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +2

Query: 329 PYYFKYLRNDWTKXGGGKY*KXNP 400
           P+ +KY+  +W   G  +    NP
Sbjct: 85  PHRWKYVNGEWVPGGKAEVPPSNP 108


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = +2

Query: 212 ETLGRTXCETYPNAGEQRAAHYRYISGKLGLIAXAMLSTPYYFKYLRN 355
           E   R    TY +A  QR   ++  +G+       MLS   Y+  + N
Sbjct: 207 EDFRRDFLRTYWSAKRQRDIRFQIATGRYDETRGTMLSHFAYYVDMAN 254


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 184 VLILFVXFTGNPWTYSLRNLPQC 252
           V+++   +    WT  L+NL  C
Sbjct: 82  VIVVTTFYKRRTWTRLLKNLESC 104


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 142 PLTSQFTWKNIGESVLILFVXFTGNPWT 225
           P    +T+  +  SVL+ F+ +  N WT
Sbjct: 46  PYLKSYTYIKLVVSVLMDFIAYFFNFWT 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,733
Number of Sequences: 336
Number of extensions: 2420
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)