Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0189
         (610 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_34652| Best HMM Match : Ank (HMM E-Value=3.8e-34)                   28   6.8  
SB_39555| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.0  

>SB_34652| Best HMM Match : Ank (HMM E-Value=3.8e-34)
          Length = 1330

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 165 EEYWRERTNPIRR--FYRKPLDVLXAKLTPMLENNVLHIIDIYLENL 299
           E+Y +ER  P++   F  +P   L A        + LHIID YL ++
Sbjct: 9   EKYRKERIEPMKGTDFPERPWSKLGADFFQHEGRHYLHIIDYYLRDI 55


>SB_39555| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 131

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 191 SYSSXLPETLGRTXCETYPNAGEQR 265
           +YSS LPET G+    + PN  E R
Sbjct: 41  AYSSALPETAGKKGDNSVPNDNEYR 65


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,159,368
Number of Sequences: 59808
Number of extensions: 298540
Number of successful extensions: 495
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)